bugreport: Wrong binary file content after cherry-pick

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git version: after v2.21.0 can reproduce this bug

reproduce steps:
git clone https://github.com/zhangchunlin/gitbug
cd gitbug
git cherry-pick dev

Then there will be a conflict with the cherry-pick, but if you run
"md5sum *", will get:
6f96c8bc9e3df2f6fef1ecbb09f218f6
ICS_usc_any_any_9.1.5_8871.uscc_261_130664_2048-release.apk
6f96c8bc9e3df2f6fef1ecbb09f218f6
ICS_usc_any_any_9.8.0_b2cbd84d94.b2cbd84_297_131010_2048-release.apk

The second file get a wrong file content.
3 related files md5:
6f96c8bc9e3df2f6fef1ecbb09f218f6
ICS_usc_any_any_9.1.5_8871.uscc_261_130664_2048-release.apk
d1bdd852b32c09ec93a5494afb3c67e7
ICS_usc_any_any_9.1.5_8871.uscc_266_130703_2048-release.apk
b2c50a9d7d488aa0b62ec7e68706ea85
ICS_usc_any_any_9.8.0_b2cbd84d94.b2cbd84_297_131010_2048-release.apk

I use git bisect to found the commit which cause this problem:
https://github.com/git/git/commit/48c9cb9d6d058bcf18e931a1ed0d88792bb506c9



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