On 04/03/2014 09:31 PM, Orion Poplawski wrote:
> Packaging (and mpi folks as they are the main users of modules) -
>
> In addition to the current environment-modules package in Fedora,
> there is at least one other implementation of the "environment modules"
> system - Lmod. This is Lua based rather than C/TCL based but can handle
> the TCL based module file format as well as a lua based format with a
> .lua extension. There is also the pure TCL version of
> environment-modules which some seem to prefer.
>
> I'd like to package Lmod for Fedora as well. My current plan is to
> use alternatives for the /etc/profile.d/modules.* links in order to
> allow both to coexist. I think we also want to move the current
> /usr/share/Modules/modulefiles system module file location to
> /usr/share/modulefiles (which would be owned by both environment-modules
> and Lmod). That way either package can make use of the modulefiles
> installed by other packages. environment-modules currently ships some
> sample modules which I'm not yet sure should stay in
> /usr/share/Modules/modulefiles (and only be used by it) or if they
> should get moved to /usr/share/modulefiles for Lmod's use as well (some
> are generic, some specific to environment-modules)
>
> We also would need some kind of virtual provide I believe for module
> using packages to require instead of the current "environment-modules".
> Perhaps environment-modules(system) or environment(modules)?
> Suggestions welcome.
>
> Any other comments?
>
> - Orion
>
I'm getting close to deploying this with:
- /usr/share/modulefiles being the new default system path. Both
environment-modules and Lmod will have /usr/share/Modules/modulefiles in
their default MODULEPATH for a bit to help with transition.
- Both with provide "environment(modules)" which module using packages
should require.
However, I'm running into problems converting environment-modules to
alternatives. /etc/profile.d/modules.sh is currently a file and it does
not get converted to a link by update-alternatives on upgrade. Any ideas?
https://fedoraproject.org/wiki/PackagingDrafts/UsingAlternatives does
not seem to mention any issues like this.
I've attached the spec I'm trying to update to. I'm afraid I'm going to
need some kind of %pre/%pretrans script to handle this.
--
Orion Poplawski
Technical Manager 303-415-9701 x222
NWRA/CoRA Division FAX: 303-415-9702
3380 Mitchell Lane orion@xxxxxxxxxxxxx
Boulder, CO 80301 http://www.cora.nwra.com
Name: environment-modules
Version: 3.2.10
Release: 9%{?dist}
Summary: Provides dynamic modification of a user's environment
Group: System Environment/Base
License: GPLv2+
URL: http://modules.sourceforge.net/
Source0: http://downloads.sourceforge.net/modules/modules-%{version}.tar.bz2
Source1: modules.sh
Source2: createmodule.sh
Source3: createmodule.py
Patch0: environment-modules-3.2.7-bindir.patch
# Comment out stray module use in modules file when not using versioning
# https://bugzilla.redhat.com/show_bug.cgi?id=895555
Patch1: environment-modules-versioning.patch
# Fix module clear command
# https://bugzilla.redhat.com/show_bug.cgi?id=895551
Patch2: environment-modules-clear.patch
# Patch from modules list to add completion to avail command
Patch3: environment-modules-avail.patch
# Fix -Werror=format-security
# https://bugzilla.redhat.com/show_bug.cgi?id=1037053
# https://sourceforge.net/p/modules/patches/13/
Patch4: environment-modules-format.patch
BuildRequires: tcl-devel, tclx-devel, libX11-devel
BuildRequires: dejagnu
BuildRequires: man
#For ps in startup script
Requires: procps
Requires(post): %{_sbindir}/update-alternatives
Requires(postun): %{_sbindir}/update-alternatives
Provides: environment(modules)
%description
The Environment Modules package provides for the dynamic modification of
a user's environment via modulefiles.
Each modulefile contains the information needed to configure the shell
for an application. Once the Modules package is initialized, the
environment can be modified on a per-module basis using the module
command which interprets modulefiles. Typically modulefiles instruct
the module command to alter or set shell environment variables such as
PATH, MANPATH, etc. modulefiles may be shared by many users on a system
and users may have their own collection to supplement or replace the
shared modulefiles.
Modules can be loaded and unloaded dynamically and atomically, in an
clean fashion. All popular shells are supported, including bash, ksh,
zsh, sh, csh, tcsh, as well as some scripting languages such as perl.
Modules are useful in managing different versions of applications.
Modules can also be bundled into metamodules that will load an entire
suite of different applications.
NOTE: You will need to get a new shell after installing this package to
have access to the module alias.
%prep
%setup -q -n modules-%{version}
%patch0 -p1 -b .bindir
%patch1 -p1 -b .versioning
%patch2 -p1 -b .clear
%patch3 -p1 -b .avail
%patch4 -p1 -b .format
%build
%configure --disable-versioning \
--prefix=%{_datadir} \
--exec-prefix=%{_datadir}/Modules \
--with-man-path=$(manpath) \
--with-module-path=%{_sysconfdir}/modulefiles:%{_datadir}/modulefiles
# --with-debug=42 --with-log-facility-debug=stderr
make %{?_smp_mflags}
%install
make install DESTDIR=$RPM_BUILD_ROOT
mkdir -p $RPM_BUILD_ROOT%{_sysconfdir}/profile.d
#touch %{buildroot}%{_sysconfdir}/profile.d/modules.{csh,sh}
ln -s /etc/alternatives/modules.csh %{buildroot}%{_sysconfdir}/profile.d/modules.csh
ln -s /etc/alternatives/modules.sh %{buildroot}%{_sysconfdir}/profile.d/modules.sh
cp -p %SOURCE1 $RPM_BUILD_ROOT%{_datadir}/Modules/init/modules.sh
cp -p %SOURCE2 %SOURCE3 $RPM_BUILD_ROOT%{_datadir}/Modules/bin
mkdir -p $RPM_BUILD_ROOT%{_sysconfdir}/modulefiles \
$RPM_BUILD_ROOT%{_datadir}/modulefiles
%check
make test
%post
%{_sbindir}/update-alternatives --install %{_sysconfdir}/profile.d/modules.sh modules.sh %{_datadir}/Modules/init/modules.sh 40 \
--slave %{_sysconfdir}/profile.d/modules.csh modules.csh %{_datadir}/Modules/init/csh
%postun
if [ $1 -eq 0 ] ; then
%{_sbindir}/update-alternatives --remove modules.sh %{_datadir}/Modules/init/modules.sh
fi
%files
%doc LICENSE.GPL README TODO
%{_sysconfdir}/modulefiles
%ghost %{_sysconfdir}/profile.d/modules.csh
%ghost %{_sysconfdir}/profile.d/modules.sh
%{_bindir}/modulecmd
%dir %{_datadir}/Modules
%{_datadir}/Modules/bin/
%dir %{_datadir}/Modules/init
%config(noreplace) %{_datadir}/Modules/init/*
%config(noreplace) %{_datadir}/Modules/init/.modulespath
%{_datadir}/Modules/modulefiles
%{_datadir}/modulefiles
%{_mandir}/man1/module.1.gz
%{_mandir}/man4/modulefile.4.gz
%changelog
* Wed Apr 9 2014 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.10-9
- Use alternatives for profile.d
- Add /usr/share/modulefiles to MODULEPATH
* Mon Dec 23 2013 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.10-8
- Fix -Werror=format-security (bug #1037053)
* Wed Sep 4 2013 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.10-7
- Update createmodule scripts to handle more path like variables (bug #976647)
* Sat Aug 03 2013 Fedora Release Engineering <rel-eng@xxxxxxxxxxxxxxxxxxxxxxx> - 3.2.10-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
* Tue May 14 2013 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.10-5
- Really do not replace modified profile.d scripts (bug #962762)
- Specfile cleanup
* Wed Apr 17 2013 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.10-4
- Do not replace modified profile.d scripts (bug #953199)
* Wed Feb 13 2013 Fedora Release Engineering <rel-eng@xxxxxxxxxxxxxxxxxxxxxxx> - 3.2.10-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Tue Jan 15 2013 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.10-2
- Add patch to comment out stray module use in modules file when not using
versioning (bug #895555)
- Add patch to fix module clear command (bug #895551)
- Add patch from modules list to add completion to avail command
* Fri Dec 21 2012 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.10-1
- Update to 3.2.10
- Drop regex patch
* Wed Oct 31 2012 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.9c-5
- Updated createmodule.sh, added createmodule.py, can handle path prefixes
* Fri Aug 24 2012 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.9c-4
- Add patch to fix segfault from Tcl RexExp handling (bug 834580)
* Wed Jul 18 2012 Fedora Release Engineering <rel-eng@xxxxxxxxxxxxxxxxxxxxxxx> - 3.2.9c-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
* Fri Jan 13 2012 Fedora Release Engineering <rel-eng@xxxxxxxxxxxxxxxxxxxxxxx> - 3.2.9c-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild
* Tue Nov 29 2011 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.9c-1
- Update to 3.2.9c (fixes bug 753760)
* Tue Nov 22 2011 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.9b-2
- Make .modulespath a config file
* Tue Nov 15 2011 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.9b-1
- Update to 3.2.9b
* Fri Nov 11 2011 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.9a-2
- Add %%check section
* Fri Nov 11 2011 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.9a-1
- Update to 3.2.9a
- Drop strcpy patch
* Thu Sep 22 2011 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.8a-3
- Add patch to fix overlapping strcpy() in Remove_Path, hopefully fixes
bug 737043
* Tue Feb 08 2011 Fedora Release Engineering <rel-eng@xxxxxxxxxxxxxxxxxxxxxxx> - 3.2.8a-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
* Mon Oct 4 2010 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.8a-1
- Update to 3.2.8a, changes --with-def-man-path to --with-man-path
* Mon Oct 4 2010 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.8-1
- Update to 3.2.8
- Drop mandir patch, use --with-def-man-path
* Thu Jan 7 2010 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7b-7
- Add patch to set a sane default MANPATH
- Add createmodule.sh utility script for creating modulefiles
* Mon Nov 30 2009 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7b-6
- Add Requires: propcs (bug #54272)
* Mon Oct 26 2009 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7b-5
- Don't assume different shell init scripts exist (bug #530770)
* Fri Oct 23 2009 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7b-4
- Don't load bash init script when bash is running as "sh" (bug #529745)
* Mon Oct 19 2009 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7b-3
- Support different flavors of "sh" (bug #529493)
* Wed Sep 23 2009 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7b-2
- Add patch to fix modulecmd path in init files
* Wed Sep 23 2009 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7b-1
- Update to 3.2.7b
* Mon Sep 21 2009 Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.7-1
- Update to 3.2.7, fixes bug #524475
- Drop versioning patch fixed upstream
* Fri Jul 24 2009 Fedora Release Engineering <rel-eng@xxxxxxxxxxxxxxxxxxxxxxx> - 3.2.6-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
* Tue Feb 24 2009 Fedora Release Engineering <rel-eng@xxxxxxxxxxxxxxxxxxxxxxx> - 3.2.6-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_11_Mass_Rebuild
* Wed Sep 3 2008 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.6-6
- Change %%patch -> %%patch0
* Fri Mar 14 2008 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.6-5
- Add BR libX11-devel so modulecmd can handle X resources
* Wed Mar 5 2008 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.6-4
- Add patch to fix extraneous version path entry properly
- Use --with-module-path to point to /etc/modulefiles for local modules,
this also fixes bug #436041
* Sat Feb 9 2008 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.6-3
- Rebuild for gcc 3.4
* Thu Jan 03 2008 - Alex Lancaster <alexlan at fedoraproject.org> - 3.2.6-2
- Rebuild for new Tcl (8.5).
* Fri Nov 2 2007 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.6-1
- Update to 3.2.6
* Tue Aug 21 2007 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.5-2
- Update license tag to GPLv2
* Fri Feb 16 2007 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.5-1
- Update to 3.2.5
* Wed Feb 14 2007 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.4-2
- Rebuild for Tcl downgrade
* Fri Feb 09 2007 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.4-1
- Update to 3.2.4
* Wed Dec 20 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.3-3
- Add --with-version-path to set VERSIONPATH (bug 220260)
* Tue Aug 29 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.3-2
- Rebuild for FC6
* Fri Jun 2 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.3-1
- Update to 3.2.3
* Fri May 5 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.2-1
- Update to 3.2.2
* Fri Mar 24 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.1-1
- Update to 3.2.1
* Thu Feb 9 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.0p1-1
- Update to 3.2.0p1
* Fri Jan 27 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.0-2
- Add profile.d links
* Tue Jan 24 2006 - Orion Poplawski <orion@xxxxxxxxxxxxx> - 3.2.0-1
- Fedora Extras packaging
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