Re: Ask for advice!

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Christopher Meng <cickumqt@xxxxxxxxx> writes:

> On Jul 30, 2014 2:24 PM, "Andreas Tille" <andreas@xxxxxxxx> wrote:
> Hi,
> First I don't use Debian for years, so I don't know how you deal with it.
> But anyway I think your effect is helpful at least.

You'd find tophat as <>.  Search at
<> if you don't know the exact name.

> Second, I didn't submit it to the review queue because in the past seqan
> was not available in Fedora until recent review from Antonio. Thus I
> bundled seqan in the package. If I push it to Fedora, I need to unbundle it
> and in this morning I failed because of the too new seqan.

I pointed that out on the review.  We definitely need to avoid
duplication.  I seem to remember there's a wiki page where work in
progress could be recorded.

> And bowtie2 is still not packaged as well, although it's not a must have
> dep so far.

I should prod Adam if he's still interested enough to do the work and
isn't listening <>

> I'd like wait for a while until upstream has fixed it.

I built it here against my version of seqan-1.4, but that failed to
build in copr, which I can't deal with now.  I haven't ported the
official seqan to EPEL6 yet.

I'll revisit this stuff in 10 days or more.
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