Hi, On Wed, Jul 30, 2014 at 04:58:32PM +0800, Christopher Meng wrote: > > First I don't use Debian for years, That's perfectly OK. > so I don't know how you deal with it. If you look at the links I've posted, in on the right side of the header of each package you will find a link to the packaging repository. Inside the debian/patches directory you will find potentially helpful patches to use also for Fedora. > But anyway I think your effect is helpful at least. I hope so. > Second, I didn't submit it to the review queue because in the past seqan > was not available in Fedora until recent review from Antonio. Thus I > bundled seqan in the package. If I push it to Fedora, I need to unbundle it > and in this morning I failed because of the too new seqan. Hint for seqan: The build of the SeQan tools needs a real lot of memory. It could be a solution to provide only the header files in a package which might be sufficient to build tophat. > And bowtie2 is still not packaged as well, although it's not a must have > dep so far. As you might have noticed bowtie2 is also packaged for Debian. I have no idea whether different architectures in Fedora are an issue but the Debian patch for this package contains better detection of the architecture. Kind regards Andreas. -- http://fam-tille.de _______________________________________________ scitech mailing list scitech@xxxxxxxxxxxxxxxxxxxxxxx https://admin.fedoraproject.org/mailman/listinfo/scitech