On Sat, Jan 19, 2013 at 10:36 AM, Toon Moene <toon@xxxxxxxxx> wrote: > > gfortran -g -Wl,-M master.o C_code.o _odb_glue.o -Wl,--start-group > -L/scratch/harmonie/hm_home/trunk/lib/linux.gfortran.mpi/src -lxrd -lxla > -ltfl -ltal -lsur -larp -lald -lbla -lmpa -lmse -lsurfex -lbip -lsat -luti > -lodb -lodbport -lCCMA -lECMA -Wl,--end-group dummies.o \ > -L/scratch/harmonie/hm_home/trunk/lib/linux.gfortran.mpi/src > -lodbdummy -L/scratch/harmonie/hm_home/trunk/lib/linux.gfortran.mpi/src > -lrgb -lgribex -lbufr -L/home/harmonie/grib_api -lgrib_api_f90 -lgrib_api > -lnetcdff -lnetcdf -llapack -lblas -lmpi_f90 -lmpi_f77 -lmpi -lpthread > /home/toon/myglibc/lib/libm.a -o > /scratch/harmonie/hm_home/trunk/lib/linux.gfortran.mpi/src/MASTERODB > > /scratch/harmonie/hm_home/trunk/lib/linux.gfortran.mpi/src/load.map > /usr/bin/ld: dynamic STT_GNU_IFUNC symbol `cos' with pointer equality in > `/home/toon/myglibc/lib/libm.a(s_sin.o)' can not be used when making an > executable; recompile with -fPIE and relink with -pie > collect2: error: ld returned 1 exit status I have no idea why this is happening to you but I can tell you what it means. The symbol "cos" has been defined as an IFUNC symbol in your library. That means that the actual value of "cos" will be selected at runtime, presumably with a version of "cos" that will execute quickly on the processor as detected at runtime. Furthermore, some piece of code in the library is using "cos" in some way other than simply calling it, e.g., taking the address of the function. As it happens, taking the address of an IFUNC function in code not compiled with -fpie or -fpic is problematic, because that code will produce different addresses in different shared libraries, meaning that function pointer equality will not work. The linker is telling you about this problem, and telling you to fix it by recompiling with -fpie. I think the right fix for you is going to be to recompile the contents of libm.a with the -fpie option. In general since your C library is using IFUNC symbols, and apparently using them in ways other than calling them, it should be compiled with -fpie. I don't know why your library makes "cos" an IFUNC symbol; I don't see that in the glibc sources I happen to have on hand. Ian
