[Bug 510843] Review Request: samtools - Tools for nucleotide sequence alignments in the SAM format

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

 



Please do not reply directly to this email. All additional
comments should be made in the comments box of this bug.


https://bugzilla.redhat.com/show_bug.cgi?id=510843


Jason Tibbitts <tibbs@xxxxxxxxxxx> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |ASSIGNED
         AssignedTo|nobody@xxxxxxxxxxxxxxxxx    |tibbs@xxxxxxxxxxx
               Flag|                            |fedora-review?




--- Comment #1 from Jason Tibbitts <tibbs@xxxxxxxxxxx>  2009-07-11 11:28:39 EDT ---
Builds fine and rpmlint is silent.

The compiler is not called with the proper set of flags.  You will need to find
some way to pass %{optflags} to the makefile.  Sometimes setting CFLAGS does
it, but sometimes you have to patch the Makefile.  At least -g is passed to the
compiler so the debuginfo package isn't broken.

I would suggest packaging the manpage as a manpage instead of leaving it with
the rest of the documentation.

Please consider using install -p to preserve the timestanps on the scripts you
install.

* source files match upstream.  sha256sum:              
   54949e99009f8f4484609b136e46439ebaa54bc9760a35f10c714e169a36f9e3
   samtools-0.1.5c.tar.bz2
* package meets naming and versioning guidelines.
* specfile is properly named, is cleanly written and uses macros consistently.
* summary is OK.                                                              
* description is OK.                                                          
* dist tag is present.
* build root is OK.
* license field matches the actual license.
* license is open source-compatible.
* license text included in package.
* latest version is being packaged.
* BuildRequires are proper.
X compiler flags are not correct.
* %clean is present.
* package builds in mock (rawhide, x86_64).
* package installs properly.
* debuginfo package looks complete.
* rpmlint is silent.
* final provides and requires are sane:
   samtools = 0.1.5c-1.fc12
   samtools(x86-64) = 0.1.5c-1.fc12
  =
   /usr/bin/perl
   libncurses.so.5()(64bit)
   libtinfo.so.5()(64bit)
   libz.so.1()(64bit)
   perl(Data::Dumper)
   perl(Getopt::Std)
   perl(strict)
   perl(warnings)

* %check is not present; no test suite upstream.  I've no idea how to test
this.
* no shared libraries are added to the regular linker search paths.
* owns the directories it creates.
* doesn't own any directories it shouldn't.
* no duplicates in %files.
* file permissions are appropriate.
* no generically named files
* code, not content.
* documentation is small, so no -doc subpackage is necessary.
* %docs are not necessary for the proper functioning of the package.
* no headers.
* no pkgconfig files.
* no static libraries.
* no libtool .la files.

The package review process needs reviewers!  If you haven't done any package
reviews recently, please consider doing one.

-- 
Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are on the CC list for the bug.

_______________________________________________
Fedora-package-review mailing list
Fedora-package-review@xxxxxxxxxx
http://www.redhat.com/mailman/listinfo/fedora-package-review

[Index of Archives]     [Fedora Legacy]     [Fedora Desktop]     [Fedora SELinux]     [Yosemite News]     [KDE Users]     [Fedora Tools]