I'll just comment on the ones I own:
.. _banshee: Boo.dll files are in an Extras/Boo directory. May be able to
disable at buildtime. Note in spec that Boo does not build on ppc
Actually Nant does not build on ppc (well 0.86-beta 1 does but look what happened when we tried that), no Nant means no ppc for Boo. Regardless when Banshee 1.0 can be rolled out this should not be an issue anymore as one of the goals as been to remove all those bundled wonders. I am inclined to think the best option is waiting and letting the problem solve itself upstream. Upstream is very friendly and on a mission to destroy these anyways.
.. _beagle: At least, TagLib-sharp, Snowball.Net and Lucene.Net. Possibly
others.
Beagle can compile against system taglib-sharp at least but the taglib-sharp package has been in review since forever. Again upstream is very friendly and can likely be convinced to work on the rest
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