Re: Yet another gargantuan mathematical software update

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On Sun, Oct 7, 2018 at 3:18 AM Jerry James <loganjerry@xxxxxxxxx> wrote:
>
> Hi folks,
>
> It's about time for another "update the world" moment for some of the
> mathematical software we have in Fedora.  I'm going to try to clear
> away a big chunk of my backlogged package work with this update, so it
> will be even bigger than usual.  Primary goals are to switch from
> atlas or the reference blas to openblas, and to drop python 2
> packages.
>
> I plan to do all of the necessary rebuilds myself.  Package
> maintainers, if you would rather that I did not rebuild your package
> for you, please let me know.  Otherwise, I will do all of these builds
> in approximately 1 week from today.  I plan to build for Rawhide only.
>
> As usual with this package set, the rebuilds will take a few days, so
> expect broken dependencies in the middle.

Thank you for doing all this work!
Seriously, I can't imagine the kind of headache that dealing with
these packages must cause.

Fabio

> 4ti2: revive this package now that latte-integrale upstream has split
> it back out
>
> arb: update to 2.15.0
>
> cddlib: update to 0.94j; epoch bump needed to deal with the new dot in
> the version number
>
> ceres-solver: rebuild for tbb
>
> cocoalib: switch to openblas
>
> cryptominisat: update to 5.6.5
>
> cxsc: switch to openblas
>
> DSDP: switch to openblas
>
> eclib: update to 20180815
>
> embree: rebuild for tbb
>
> fawkes: rebuild for tbb
>
> fflas-ffpack: switch to openblas
>
> flint: switch to openblas (needs rebuild anyway due to ntl update)
>
> gazebo: rebuild for tbb
>
> gfan: rebuild for cddlib
>
> giac: rebuild for ntl
>
> iml: switch to openblas
>
> latte-integrale: update to 1.7.5.  Not really integrale anymore since
> 4ti2 was unbundled...
>
> linbox: switch to openblas, enable OpenCL interface
>
> Macaulay2: switch to openblas (needs rebuild anyway due to ntl update)
>
> mathicgb: rebuild for tbb, fix incompatibility with recent gtest versions
>
> ntl: update to 11.3.0.  This involves an soname bump.
>
> OCE: rebuild for tbb
>
> opencv: rebuild for tbb
>
> openvdb: rebuild for tbb
>
> polymake: rebuild for cddlib
>
> pynac: switch to openblas, switch from python 2 to python 3
>
> python-cvxopt: update to 1.2.1, switch to openblas, drop the python 2 subpackage
>
> python-fastcache: update to 1.1.0, drop the python 2 subpackage
>
> python-networkx: update to 2.1, drop the python 2 subpackages,
> consolidate back to a single package again since this cannot appear in
> EPEL < 8 anyway
>
> python-theano: switch to openblas, build with libgpuarray for OpenCL
> support, drop the python 2 subpackage
>
> root: rebuild for tbb
>
> sagemath: switch to openblas, switch (with great fear and trepidation)
> to the experimental python 3 build
>
> Singular: rebuild for cddlib
>
> suitesparse: rebuild for tbb
>
> sympol: rebuild for cddlib
>
> sympy: update to 1.3, drop the python 2 subpackage
>
> tbb: update to 2019_U1.  This has the same soname, but has a
> backwards-incompatible ABI change on 32-bit platforms.  Therefore, all
> consumers must be rebuilt.
>
> TOPCOM: rebuild for cddlib
>
> Regards,
> --
> Jerry James
> http://www.jamezone.org/
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