Understanding incomplete PGs

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Hello,

I'm working with a small ceph cluster (about 10TB, 7-9 OSDs, all Bluestore on 
lvm) and recently ran into a problem with 17 pgs marked as incomplete after 
adding/removing OSDs.

Here's the sequence of events:
1. 7 osds in the cluster, health is OK, all pgs are active+clean
2. 3 new osds on a new host are added, lots of backfilling in progress
3. osd 6 needs to be removed, so we do "ceph osd crush reweight osd.6 0"
4. after a few hours we see "min osd.6 with 0 pgs" from "ceph osd utilization"
5. ceph osd out 6
6. systemctl stop ceph-osd@6
7. the drive backing osd 6 is pulled and wiped
8. backfilling has now finished all pgs are active+clean except for 17 
incomplete pgs

>From reading the docs, it sounds like there has been unrecoverable data loss 
in those 17 pgs. That raises some questions for me:

Was "ceph osd utilization" only showing a goal of 0 pgs allocated instead of 
the current actual allocation?

Why is there data loss from a single osd being removed? Shouldn't that be 
recoverable?
All pools in the cluster are either replicated 3 or erasure-coded k=2,m=1 with 
default "host" failure domain. They shouldn't suffer data loss with a single 
osd being removed even if there were no reweighting beforehand. Does the 
backfilling temporarily reduce data durability in some way?

Is there a way to see which pgs actually have data on a given osd?

I attached an example of one of the incomplete pgs.

Thanks for any help,

Kyle
{
    "state": "incomplete",
    "snap_trimq": "[]",
    "snap_trimq_len": 0,
    "epoch": 2087,
    "up": [
        4,
        3,
        8
    ],
    "acting": [
        4,
        3,
        8
    ],
    "info": {
        "pgid": "15.59s0",
        "last_update": "753'7465",
        "last_complete": "753'7465",
        "log_tail": "663'4401",
        "last_user_version": 6947,
        "last_backfill": "MAX",
        "last_backfill_bitwise": 0,
        "purged_snaps": [],
        "history": {
            "epoch_created": 603,
            "epoch_pool_created": 603,
            "last_epoch_started": 1581,
            "last_interval_started": 1580,
            "last_epoch_clean": 945,
            "last_interval_clean": 944,
            "last_epoch_split": 0,
            "last_epoch_marked_full": 0,
            "same_up_since": 2082,
            "same_interval_since": 2082,
            "same_primary_since": 2076,
            "last_scrub": "753'7465",
            "last_scrub_stamp": "2019-07-02 13:40:58.935208",
            "last_deep_scrub": "0'0",
            "last_deep_scrub_stamp": "2019-06-27 17:42:04.685790",
            "last_clean_scrub_stamp": "2019-07-02 13:40:58.935208"
        },
        "stats": {
            "version": "753'7465",
            "reported_seq": "12691",
            "reported_epoch": "2087",
            "state": "incomplete",
            "last_fresh": "2019-07-04 14:30:47.930190",
            "last_change": "2019-07-04 14:30:47.930190",
            "last_active": "2019-07-03 13:04:00.967354",
            "last_peered": "2019-07-03 13:02:40.242867",
            "last_clean": "2019-07-02 23:04:26.601070",
            "last_became_active": "2019-07-03 08:35:12.459857",
            "last_became_peered": "2019-07-03 08:35:12.459857",
            "last_unstale": "2019-07-04 14:30:47.930190",
            "last_undegraded": "2019-07-04 14:30:47.930190",
            "last_fullsized": "2019-07-04 14:30:47.930190",
            "mapping_epoch": 2082,
            "log_start": "663'4401",
            "ondisk_log_start": "663'4401",
            "created": 603,
            "last_epoch_clean": 945,
            "parent": "0.0",
            "parent_split_bits": 0,
            "last_scrub": "753'7465",
            "last_scrub_stamp": "2019-07-02 13:40:58.935208",
            "last_deep_scrub": "0'0",
            "last_deep_scrub_stamp": "2019-06-27 17:42:04.685790",
            "last_clean_scrub_stamp": "2019-07-02 13:40:58.935208",
            "log_size": 3064,
            "ondisk_log_size": 3064,
            "stats_invalid": false,
            "dirty_stats_invalid": false,
            "omap_stats_invalid": false,
            "hitset_stats_invalid": false,
            "hitset_bytes_stats_invalid": false,
            "pin_stats_invalid": false,
            "manifest_stats_invalid": false,
            "snaptrimq_len": 0,
            "stat_sum": {
                "num_bytes": 12872933376,
                "num_objects": 3094,
                "num_object_clones": 0,
                "num_object_copies": 9282,
                "num_objects_missing_on_primary": 0,
                "num_objects_missing": 0,
                "num_objects_degraded": 0,
                "num_objects_misplaced": 0,
                "num_objects_unfound": 0,
                "num_objects_dirty": 3094,
                "num_whiteouts": 0,
                "num_read": 896,
                "num_read_kb": 3708,
                "num_write": 5870,
                "num_write_kb": 12567180,
                "num_scrub_errors": 0,
                "num_shallow_scrub_errors": 0,
                "num_deep_scrub_errors": 0,
                "num_objects_recovered": 284,
                "num_bytes_recovered": 1178091520,
                "num_keys_recovered": 0,
                "num_objects_omap": 0,
                "num_objects_hit_set_archive": 0,
                "num_bytes_hit_set_archive": 0,
                "num_flush": 0,
                "num_flush_kb": 0,
                "num_evict": 0,
                "num_evict_kb": 0,
                "num_promote": 0,
                "num_flush_mode_high": 0,
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                "num_objects_pinned": 0,
                "num_legacy_snapsets": 0,
                "num_large_omap_objects": 0,
                "num_objects_manifest": 0
            },
            "up": [
                4,
                3,
                8
            ],
            "acting": [
                4,
                3,
                8
            ],
            "blocked_by": [
                6
            ],
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            "purged_snaps": []
        },
        "empty": 0,
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        "last_epoch_started": 1581,
        "hit_set_history": {
            "current_last_update": "0'0",
            "history": []
        }
    },
    "peer_info": [
        {
            "peer": "0(0)",
            "pgid": "15.59s0",
            "last_update": "0'0",
            "last_complete": "0'0",
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            "purged_snaps": [],
            "history": {
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                "last_epoch_started": 0,
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                "last_fullsized": "0.000000",
                "mapping_epoch": 0,
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                "last_scrub": "0'0",
                "last_scrub_stamp": "0.000000",
                "last_deep_scrub": "0'0",
                "last_deep_scrub_stamp": "0.000000",
                "last_clean_scrub_stamp": "0.000000",
                "log_size": 0,
                "ondisk_log_size": 0,
                "stats_invalid": false,
                "dirty_stats_invalid": false,
                "omap_stats_invalid": false,
                "hitset_stats_invalid": false,
                "hitset_bytes_stats_invalid": false,
                "pin_stats_invalid": false,
                "manifest_stats_invalid": false,
                "snaptrimq_len": 0,
                "stat_sum": {
                    "num_bytes": 0,
                    "num_objects": 0,
                    "num_object_clones": 0,
                    "num_object_copies": 0,
                    "num_objects_missing_on_primary": 0,
                    "num_objects_missing": 0,
                    "num_objects_degraded": 0,
                    "num_objects_misplaced": 0,
                    "num_objects_unfound": 0,
                    "num_objects_dirty": 0,
                    "num_whiteouts": 0,
                    "num_read": 0,
                    "num_read_kb": 0,
                    "num_write": 0,
                    "num_write_kb": 0,
                    "num_scrub_errors": 0,
                    "num_shallow_scrub_errors": 0,
                    "num_deep_scrub_errors": 0,
                    "num_objects_recovered": 0,
                    "num_bytes_recovered": 0,
                    "num_keys_recovered": 0,
                    "num_objects_omap": 0,
                    "num_objects_hit_set_archive": 0,
                    "num_bytes_hit_set_archive": 0,
                    "num_flush": 0,
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                    "num_objects_pinned": 0,
                    "num_legacy_snapsets": 0,
                    "num_large_omap_objects": 0,
                    "num_objects_manifest": 0
                },
                "up": [],
                "acting": [],
                "blocked_by": [],
                "up_primary": -1,
                "acting_primary": -1,
                "purged_snaps": []
            },
            "empty": 1,
            "dne": 1,
            "incomplete": 0,
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                "history": []
            }
        },
        {
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                "last_deep_scrub": "0'0",
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                "last_clean_scrub_stamp": "2019-07-02 13:40:58.935208"
            },
            "stats": {
                "version": "753'7465",
                "reported_seq": "7690",
                "reported_epoch": "1748",
                "state": "remapped",
                "last_fresh": "2019-07-03 17:45:14.373257",
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                    "num_objects": 283,
                    "num_object_clones": 0,
                    "num_object_copies": 849,
                    "num_objects_missing_on_primary": 0,
                    "num_objects_missing": 2812,
                    "num_objects_degraded": 0,
                    "num_objects_misplaced": 0,
                    "num_objects_unfound": 0,
                    "num_objects_dirty": 283,
                    "num_whiteouts": 0,
                    "num_read": 0,
                    "num_read_kb": 0,
                    "num_write": 0,
                    "num_write_kb": 0,
                    "num_scrub_errors": 0,
                    "num_shallow_scrub_errors": 0,
                    "num_deep_scrub_errors": 0,
                    "num_objects_recovered": 0,
                    "num_bytes_recovered": 0,
                    "num_keys_recovered": 0,
                    "num_objects_omap": 0,
                    "num_objects_hit_set_archive": 0,
                    "num_bytes_hit_set_archive": 0,
                    "num_flush": 0,
                    "num_flush_kb": 0,
                    "num_evict": 0,
                    "num_evict_kb": 0,
                    "num_promote": 0,
                    "num_flush_mode_high": 0,
                    "num_flush_mode_low": 0,
                    "num_evict_mode_some": 0,
                    "num_evict_mode_full": 0,
                    "num_objects_pinned": 0,
                    "num_legacy_snapsets": 0,
                    "num_large_omap_objects": 0,
                    "num_objects_manifest": 0
                },
                "up": [
                    4,
                    3,
                    8
                ],
                "acting": [
                    4,
                    3,
                    8
                ],
                "blocked_by": [],
                "up_primary": 4,
                "acting_primary": 4,
                "purged_snaps": []
            },
            "empty": 0,
            "dne": 0,
            "incomplete": 1,
            "last_epoch_started": 1233,
            "hit_set_history": {
                "current_last_update": "0'0",
                "history": []
            }
        }
    ],
    "recovery_state": [
        {
            "name": "Started/Primary/Peering/Incomplete",
            "enter_time": "2019-07-04 14:30:47.930184",
            "comment": "not enough complete instances of this PG"
        },
        {
            "name": "Started/Primary/Peering",
            "enter_time": "2019-07-04 14:30:47.911177",
            "past_intervals": [
                {
                    "first": "944",
                    "last": "2081",
                    "all_participants": [
                        {
                            "osd": 0,
                            "shard": 0
                        },
                        {
                            "osd": 1,
                            "shard": 2
                        },
                        {
                            "osd": 3,
                            "shard": 1
                        },
                        {
                            "osd": 4,
                            "shard": 0
                        },
                        {
                            "osd": 6,
                            "shard": 1
                        },
                        {
                            "osd": 8,
                            "shard": 2
                        }
                    ],
                    "intervals": [
                        {
                            "first": "1580",
                            "last": "1664",
                            "acting": "1(2),4(0),6(1)"
                        },
                        {
                            "first": "2076",
                            "last": "2079",
                            "acting": "3(1),4(0),8(2)"
                        }
                    ]
                }
            ],
            "probing_osds": [
                "0(0)",
                "1(2)",
                "3(1)",
                "4(0)",
                "8(2)"
            ],
            "down_osds_we_would_probe": [
                6
            ],
            "peering_blocked_by": [],
            "peering_blocked_by_detail": [
                {
                    "detail": "peering_blocked_by_history_les_bound"
                }
            ]
        },
        {
            "name": "Started",
            "enter_time": "2019-07-04 14:30:47.911073"
        }
    ],
    "agent_state": {}
}
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