Re: Is anyone seeing iissues with task_numa_find_cpu?

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On Tue, Jul 19, 2016 at 12:04 PM, Alex Gorbachev <ag@xxxxxxxxxxxxxxxxxxx> wrote:
> On Mon, Jul 18, 2016 at 4:41 AM, Василий Ангапов <angapov@xxxxxxxxx> wrote:
>> Guys,
>>
>> This bug is hitting me constantly, may be once per several days. Does
>> anyone know is there a solution already?
>
>
> I see there is a fix available, and am waiting for a backport to a
> longterm kernel:
>
> https://lkml.org/lkml/2016/7/12/919
>
> https://lkml.org/lkml/2016/7/12/297
>
> --
> Alex Gorbachev
> Storcium


No more issues on the latest kernel builds.

Alex

>
>
>
>
>>
>> 2016-07-05 11:47 GMT+03:00 Nick Fisk <nick@xxxxxxxxxx>:
>>>> -----Original Message-----
>>>> From: ceph-users [mailto:ceph-users-bounces@xxxxxxxxxxxxxx] On Behalf Of
>>>> Alex Gorbachev
>>>> Sent: 04 July 2016 20:50
>>>> To: Campbell Steven <casteven@xxxxxxxxx>
>>>> Cc: ceph-users <ceph-users@xxxxxxxxxxxxxx>; Tim Bishop <tim-
>>>> lists@xxxxxxxxxxx>
>>>> Subject: Re:  Is anyone seeing iissues with
>>>> task_numa_find_cpu?
>>>>
>>>> On Wed, Jun 29, 2016 at 5:41 AM, Campbell Steven <casteven@xxxxxxxxx>
>>>> wrote:
>>>> > Hi Alex/Stefan,
>>>> >
>>>> > I'm in the middle of testing 4.7rc5 on our test cluster to confirm
>>>> > once and for all this particular issue has been completely resolved by
>>>> > Peter's recent patch to sched/fair.c refereed to by Stefan above. For
>>>> > us anyway the patches that Stefan applied did not solve the issue and
>>>> > neither did any 4.5.x or 4.6.x released kernel thus far, hopefully it
>>>> > does the trick for you. We could get about 4 hours uptime before
>>>> > things went haywire for us.
>>>> >
>>>> > It's interesting how it seems the CEPH workload triggers this bug so
>>>> > well as it's quite a long standing issue that's only just been
>>>> > resolved, another user chimed in on the lkml thread a couple of days
>>>> > ago as well and again his trace had ceph-osd in it as well.
>>>> >
>>>> > https://lkml.org/lkml/headers/2016/6/21/491
>>>> >
>>>> > Campbell
>>>>
>>>> Campbell, any luck with testing 4.7rc5?  rc6 came out just now, and I am
>>>> having trouble booting it on an ubuntu box due to some other unrelated
>>>> problem.  So dropping to kernel 4.2.0 for now, which does not seem to have
>>>> this load related problem.
>>>>
>>>> I looked at the fair.c code in kernel source tree 4.4.14 and it is quite
>>> different
>>>> than Peter's patch (assuming 4.5.x source), so the patch does not apply
>>>> cleanly.  Maybe another 4.4.x kernel will get the update.
>>>
>>> I put in a new 16.04 node yesterday and went straight to 4.7.rc6. It's been
>>> backfilling for just under 24 hours now with no drama. Disks are set to use
>>> CFQ.
>>>
>>>>
>>>> Thanks,
>>>> Alex
>>>>
>>>>
>>>>
>>>> >
>>>> > On 29 June 2016 at 18:29, Stefan Priebe - Profihost AG
>>>> > <s.priebe@xxxxxxxxxxxx> wrote:
>>>> >>
>>>> >> Am 29.06.2016 um 04:30 schrieb Alex Gorbachev:
>>>> >>> Hi Stefan,
>>>> >>>
>>>> >>> On Tue, Jun 28, 2016 at 1:46 PM, Stefan Priebe - Profihost AG
>>>> >>> <s.priebe@xxxxxxxxxxxx> wrote:
>>>> >>>> Please be aware that you may need even more patches. Overall this
>>>> >>>> needs 3 patches. Where the first two try to fix a bug and the 3rd
>>>> >>>> one fixes the fixes + even more bugs related to the scheduler. I've
>>>> >>>> no idea on which patch level Ubuntu is.
>>>> >>>
>>>> >>> Stefan, would you be able to please point to the other two patches
>>>> >>> beside https://lkml.org/lkml/diff/2016/6/22/102/1 ?
>>>> >>
>>>> >> Sorry sure yes:
>>>> >>
>>>> >> 1. 2b8c41daba32 ("sched/fair: Initiate a new task's util avg to a
>>>> >> bounded value")
>>>> >>
>>>> >> 2.) 40ed9cba24bb7e01cc380a02d3f04065b8afae1d ("sched/fair: Fix
>>>> >> post_init_entity_util_avg() serialization")
>>>> >>
>>>> >> 3.) the one listed at lkml.
>>>> >>
>>>> >> Stefan
>>>> >>
>>>> >>>
>>>> >>> Thank you,
>>>> >>> Alex
>>>> >>>
>>>> >>>>
>>>> >>>> Stefan
>>>> >>>>
>>>> >>>> Excuse my typo sent from my mobile phone.
>>>> >>>>
>>>> >>>> Am 28.06.2016 um 17:59 schrieb Tim Bishop <tim-lists@xxxxxxxxxxx>:
>>>> >>>>
>>>> >>>> Yes - I noticed this today on Ubuntu 16.04 with the default kernel.
>>>> >>>> No useful information to add other than it's not just you.
>>>> >>>>
>>>> >>>> Tim.
>>>> >>>>
>>>> >>>> On Tue, Jun 28, 2016 at 11:05:40AM -0400, Alex Gorbachev wrote:
>>>> >>>>
>>>> >>>> After upgrading to kernel 4.4.13 on Ubuntu, we are seeing a few of
>>>> >>>>
>>>> >>>> these issues where an OSD would fail with the stack below.  I
>>>> >>>> logged a
>>>> >>>>
>>>> >>>> bug at https://bugzilla.kernel.org/show_bug.cgi?id=121101 and there
>>>> >>>> is
>>>> >>>>
>>>> >>>> a similar description at https://lkml.org/lkml/2016/6/22/102, but
>>>> >>>> the
>>>> >>>>
>>>> >>>> odd part is we have turned off CFQ and blk-mq/scsi-mq and are using
>>>> >>>>
>>>> >>>> just the noop scheduler.
>>>> >>>>
>>>> >>>>
>>>> >>>> Does the ceph kernel code somehow use the fair scheduler code
>>>> block?
>>>> >>>>
>>>> >>>>
>>>> >>>> Thanks
>>>> >>>>
>>>> >>>> --
>>>> >>>>
>>>> >>>> Alex Gorbachev
>>>> >>>>
>>>> >>>> Storcium
>>>> >>>>
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.684974] CPU: 30 PID:
>>>> >>>>
>>>> >>>> 10403 Comm: ceph-osd Not tainted 4.4.13-040413-generic
>>>> >>>> #201606072354
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.684991] Hardware name:
>>>> >>>>
>>>> >>>> Supermicro X9DRi-LN4+/X9DR3-LN4+/X9DRi-LN4+/X9DR3-LN4+, BIOS
>>>> 3.2
>>>> >>>>
>>>> >>>> 03/04/2015
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685009] task:
>>>> >>>>
>>>> >>>> ffff880f79df8000 ti: ffff880f79fb8000 task.ti: ffff880f79fb8000
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685024] RIP:
>>>> >>>>
>>>> >>>> 0010:[<ffffffff810b416e>]  [<ffffffff810b416e>]
>>>> >>>>
>>>> >>>> task_numa_find_cpu+0x22e/0x6f0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685051] RSP:
>>>> >>>>
>>>> >>>> 0018:ffff880f79fbb818  EFLAGS: 00010206
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685063] RAX:
>>>> >>>>
>>>> >>>> 0000000000000000 RBX: ffff880f79fbb8b8 RCX: 0000000000000000
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685076] RDX:
>>>> >>>>
>>>> >>>> 0000000000000000 RSI: 0000000000000000 RDI: ffff8810352d4800
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685107] RBP:
>>>> >>>>
>>>> >>>> ffff880f79fbb880 R08: 00000001020cf87c R09: 0000000000ff00ff
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685150] R10:
>>>> >>>>
>>>> >>>> 0000000000000009 R11: 0000000000000006 R12: ffff8807c3adc4c0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685194] R13:
>>>> >>>>
>>>> >>>> 0000000000000006 R14: 000000000000033e R15: fffffffffffffec7
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685238] FS:
>>>> >>>>
>>>> >>>> 00007f30e46b8700(0000) GS:ffff88105f580000(0000)
>>>> >>>>
>>>> >>>> knlGS:0000000000000000
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685283] CS:  0010 DS:
>>>> >>>>
>>>> >>>> 0000 ES: 0000 CR0: 0000000080050033
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685310] CR2:
>>>> >>>>
>>>> >>>> 000000001321a000 CR3: 0000000853598000 CR4: 00000000000406e0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685354] Stack:
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685374]
>>>> >>>>
>>>> >>>> ffffffff813d050f 000000000000000d 0000000000000045 ffff880f79df8000
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685426]
>>>> >>>>
>>>> >>>> 000000000000033f 0000000000000000 0000000000016b00
>>>> 000000000000033f
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685477]
>>>> >>>>
>>>> >>>> ffff880f79df8000 ffff880f79fbb8b8 00000000000001f4 0000000000000054
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685528] Call Trace:
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685555]
>>>> >>>>
>>>> >>>> [<ffffffff813d050f>] ? cpumask_next_and+0x2f/0x40
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685584]
>>>> >>>>
>>>> >>>> [<ffffffff810b4a6e>] task_numa_migrate+0x43e/0x9b0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685613]
>>>> >>>>
>>>> >>>> [<ffffffff810b3acc>] ? update_cfs_shares+0xbc/0x100
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685642]
>>>> >>>>
>>>> >>>> [<ffffffff810b5059>] numa_migrate_preferred+0x79/0x80
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685672]
>>>> >>>>
>>>> >>>> [<ffffffff810b9b94>] task_numa_fault+0x7f4/0xd40
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685700]
>>>> >>>>
>>>> >>>> [<ffffffff813d9634>] ? timerqueue_del+0x24/0x70
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685729]
>>>> >>>>
>>>> >>>> [<ffffffff810b9205>] ? should_numa_migrate_memory+0x55/0x130
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685762]
>>>> >>>>
>>>> >>>> [<ffffffff811bd590>] handle_mm_fault+0xbc0/0x1820
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685793]
>>>> >>>>
>>>> >>>> [<ffffffff810edc00>] ? __hrtimer_init+0x90/0x90
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685822]
>>>> >>>>
>>>> >>>> [<ffffffff810c211d>] ? remove_wait_queue+0x4d/0x60
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685853]
>>>> >>>>
>>>> >>>> [<ffffffff8121e20a>] ? poll_freewait+0x4a/0xa0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685882]
>>>> >>>>
>>>> >>>> [<ffffffff8106a537>] __do_page_fault+0x197/0x400
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685910]
>>>> >>>>
>>>> >>>> [<ffffffff8106a7c2>] do_page_fault+0x22/0x30
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685939]
>>>> >>>>
>>>> >>>> [<ffffffff8180a878>] page_fault+0x28/0x30
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685967]
>>>> >>>>
>>>> >>>> [<ffffffff813e4c5f>] ? copy_page_to_iter_iovec+0x5f/0x300
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.685997]
>>>> >>>>
>>>> >>>> [<ffffffff810b2795>] ? select_task_rq_fair+0x625/0x700
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686026]
>>>> >>>>
>>>> >>>> [<ffffffff813e4f16>] copy_page_to_iter+0x16/0xa0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686056]
>>>> >>>>
>>>> >>>> [<ffffffff816f02ad>] skb_copy_datagram_iter+0x14d/0x280
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686087]
>>>> >>>>
>>>> >>>> [<ffffffff8174a503>] tcp_recvmsg+0x613/0xbe0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686117]
>>>> >>>>
>>>> >>>> [<ffffffff8177844e>] inet_recvmsg+0x7e/0xb0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686146]
>>>> >>>>
>>>> >>>> [<ffffffff816e0d3b>] sock_recvmsg+0x3b/0x50
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686173]
>>>> >>>>
>>>> >>>> [<ffffffff816e0f91>] SYSC_recvfrom+0xe1/0x160
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686202]
>>>> >>>>
>>>> >>>> [<ffffffff810f36f5>] ? ktime_get_ts64+0x45/0xf0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686230]
>>>> >>>>
>>>> >>>> [<ffffffff816e239e>] SyS_recvfrom+0xe/0x10
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686259]
>>>> >>>>
>>>> >>>> [<ffffffff818086f2>] entry_SYSCALL_64_fastpath+0x16/0x71
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686287] Code: 55 b0
>>>> >>>> 4c
>>>> >>>>
>>>> >>>> 89 f7 e8 53 cd ff ff 48 8b 55 b0 49 8b 4e 78 48 8b 82 d8 01 00 00
>>>> >>>> 48
>>>> >>>>
>>>> >>>> 83 c1 01 31 d2 49 0f af 86 b0 00 00 00 4c 8b 73 78 <48> f7 f1 48 8b
>>>> >>>> 4b
>>>> >>>>
>>>> >>>> 20 49 89 c0 48 29 c1 48 8b 45 d0 4c 03 43 48
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686512] RIP
>>>> >>>>
>>>> >>>> [<ffffffff810b416e>] task_numa_find_cpu+0x22e/0x6f0
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686544]  RSP
>>>> >>>> <ffff880f79fbb818>
>>>> >>>>
>>>> >>>> Jun 28 09:46:41 roc04r-sca090 kernel: [137912.686896] ---[ end
>>>> >>>> trace
>>>> >>>>
>>>> >>>> 544cb9f68cb55c93 ]---
>>>> >>>>
>>>> >>>> Jun 28 09:52:15 roc04r-sca090 kernel: [138246.669713] mpt2sas_cm0:
>>>> >>>>
>>>> >>>> log_info(0x30030101): originator(IOP), code(0x03), sub_code(0x0101)
>>>> >>>>
>>>> >>>> Jun 28 09:55:01 roc0
>>>> >>>>
>>>> >>>> _______________________________________________
>>>> >>>>
>>>> >>>> ceph-users mailing list
>>>> >>>>
>>>> >>>> ceph-users@xxxxxxxxxxxxxx
>>>> >>>>
>>>> >>>> http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>>>> >>>>
>>>> >>>>
>>>> >>>>
>>>> >>>> Tim.
>>>> >>>>
>>>> >>>> --
>>>> >>>> Tim Bishop
>>>> >>>> http://www.bishnet.net/tim/
>>>> >>>> PGP Key: 0x6C226B37FDF38D55
>>>> >>>>
>>>> >>>> _______________________________________________
>>>> >>>> ceph-users mailing list
>>>> >>>> ceph-users@xxxxxxxxxxxxxx
>>>> >>>> http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>>>> >> _______________________________________________
>>>> >> ceph-users mailing list
>>>> >> ceph-users@xxxxxxxxxxxxxx
>>>> >> http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>>>> _______________________________________________
>>>> ceph-users mailing list
>>>> ceph-users@xxxxxxxxxxxxxx
>>>> http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>>>
>>> _______________________________________________
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