On Wed, 9 Sep 2020 13:33:05 -0600 Jerry James <loganjerry@xxxxxxxxx> wrote: > On Wed, Sep 9, 2020 at 1:12 PM Ranjan Maitra <maitra@xxxxxxxxx> wrote: > > Thanks, so this appears to be a Fedora problem. Btw, I tried oracle's jdk-14.0.2_linux-x64_bin.rpm and had the same result. > > > > I filed a bug report: https://bugzilla.redhat.com/show_bug.cgi?id=1877524 > > Why does everyone seem to think this is a Java bug? The system log > showed that a crash occurred in Rf_eval (libR.so + 0x157ab3); i.e., in > the R library. The stack trace shows a lot of calls to these > functions: > > bcEval > forcePromise > getvar > R_execClosure > Rf_appyClosure > Rf_eval > > It's possible that R is being handed an expression to evaluate that is > so complex that it runs out of stack space, or there could be an > infinite recursion bug in R somewhere. If the former, the solution is > to bump up the stack space. I would try the -Xss argument to java > first to see if that makes the issue go away. I'm not sure what the > default value is, so I don't know what to suggest, but maybe start > with something like -Xss4M. If that fixes the issue, then retry with > successively smaller values to find something reasonable that is still > big enough to work. Jerry, Thanks for pointing this out. So, on the commandline for R, the equivalent call: ggplot() + geom_boxplot(aes(y = speed), data = cars) plots without a hitch. Now boxplots require calculations of three quartiles, and a couple more calculations to decide on outliers, and this may be a R problem, but this is a 50-observations dataset. Besides, the call inside JGR works with Windows as well as Mac and on Ubuntu 20.04 (per George), but crashes things on Fedora. How do I add the argument to java that you suggest? Where do I do this? Many thanks, Ranjan _______________________________________________ users mailing list -- users@xxxxxxxxxxxxxxxxxxxxxxx To unsubscribe send an email to users-leave@xxxxxxxxxxxxxxxxxxxxxxx Fedora Code of Conduct: https://docs.fedoraproject.org/en-US/project/code-of-conduct/ List Guidelines: https://fedoraproject.org/wiki/Mailing_list_guidelines List Archives: https://lists.fedoraproject.org/archives/list/users@xxxxxxxxxxxxxxxxxxxxxxx
