They don't seem to get all that bad in general, especially in our new KMS world of tiny fonts. I have another patch to void this problem, but it's a bit of a hack - basically, I make log_method_call() remember the depth of the shortest stack it's ever seen, and subtract that number from len(stack). Then I added a call to log_method_call() call at the beginning of DeviceTree.__init__(), since that appears to be in every call path that ever calls it, or at least the vast majority of them. As I said, a bit of a hack.
Let's wait until either we can see an example where it looks terrible or someone else starts to complain. Then we can use the hack or perhaps come up with something more systematic.
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