Run a program

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Hi!
I'd like to be able to run a program from a php-script. I've tried running the following command, and it works when I run it from the Run-dialog:
D:\Cygwin\bin\bash.exe --login -i script.sh arg1 arg2
(the shell script runs another program (fontforge) which too runs a script)

However, when I try to run the same command from a php-script nothing happens. Or rather, bash starts, but it doesn't do what it does when i run the same command from the Run-dialog. I'm not even sure if I'm using the right php-command and syntax. Could you please tell me how to do?
I'm on Win XP Home if that matters...
Thanks in advance! /Jacob

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