Ok where in the startup. This is critical. If you want to start it up like a Linux service you will need it to operate perfectly using wineconsole not wine. Since unlike windows, linux services don't have direct access to graphical interface. There are ways around this but its messy. Also unlike windows it is preferred that services under Linux have there own user and restrictions for security reasons. Now if you want application starting when you login there is a different way to that.