is it possible to enable "emulate virtual desktop" per application?

[Bond Masuda <bm007@xxxxxxx>]

As i'm discovering that some applications work best with "emulate 
virtual desktop" while I prefer to run others without that setting 
enabled. Is it possible to enable/disable that feature on a per 
application basis?

For example, if I leave it off, is there a command line option i can add 
to a shortcut/script that enables it only for a particular application?

Thanks...