Re:

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> The issue is the entire array will occasionally pause completely
> for about 40 seconds when a file is created. [ ... ] During heavy
> file transfer activity, sometimes the system halts with every
> other file creation. [ ... ] There are other drives formatted
> with other file systems on the machine, but the issue has never
> been seen on any of the other drives.  When the array runs its
> regularly scheduled health check, the problem is much worse. [
> ... ]

Looks like that either you have hw issues (transfer errors, bad
blocks) or more likely the cache flusher and elevator settings have
not been tuned for a steady flow.

> How can I troubleshoot and more importantly resolve this issue?

Well, troubleshooting would require a good understanding of file
system design and storage subsystem design, and quite a bit of time.

However, for hardware errors check the kernel logs, and for cache
flusher and elevator settings check the 'bi'/'bo' numbers of
'vmstat 1' while the pause happens.

For a deeper profile of per-drive IO run 'watch iostat 1 2' while
this is happening. This might also help indicate drive errors (no
IO is happening) or flusher/elevator tuning issues (lots of IO is
happening suddenfly).
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