sql output to a multidimensional array

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I need the output of my sql to be a multidimensional array as follows.
chart [ 'chart_data' ] =3D array ( array ( "",   "2001", "2002", "2003",
"2004" ),
                                  array ( "AAA",     0,     10,     30,
63  ),
                                  array ( "BBB",   100,     20,     65,
55  ),
                                  array ( "CCC",    56,     21,      0,
90  )
                                );
I have tried and am unable so far to get this out of my database. 
Any suggestions? 
"SELECT count( publications.title) AS title_number, publications.year,
publications.affiliation=20 FROM publications GROUP BY affiliation, year
ORDER BY year"; 

There is some "for loop" I am not getting, and am also not getting the =
zero counts with the count(*). 

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