I assume something like the following would work, regardless of whether/how you've called mysql_select_db()
SELECT t1.column FROM database1.table1 t1 JOIN database2.table2 t2 ON t1.id = t2.id
If you have something working from the MySQL command line, then it's going to work from mysql_query() with the same exact syntax.
You are indeed correct. I had a bug in my join syntax. How embarrassing.
For the record, you don't even have to call mysql_select_db() at all.
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