query with pg_trgm sometimes very slow

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Hi,
I have a table for addresses:

CREATE TABLE adressen.adresse
(
   pool_pk      integer         NOT NULL,
   adressnr_pk  integer         NOT NULL,
   anrede       varchar(8),
   vorname      varchar(50)     DEFAULT ''::character varying NOT NULL,
   name1        varchar(100)    NOT NULL,
   name2        varchar(80)     DEFAULT ''::character varying NOT NULL,
   name3        varchar(80)     DEFAULT ''::character varying NOT NULL,
   strasse      varchar(80)     DEFAULT ''::character varying NOT NULL,
   plz          varchar(8)      DEFAULT ''::character varying NOT NULL,
   ort          varchar(80)     DEFAULT ''::character varying NOT NULL,
   changed      timestamptz,
   id2          integer
);

The primary key is on 'pool_pk' and 'adressnr_pk' and amongst some other indexes there is an index

CREATE INDEX trgm_adresse ON adressen.adresse USING gist (normalize_string((btrim((((((((normalize_string((((COALESCE((vorname)::text, ''::text) || ' '::text) || (name1)::text))::character varying, (-1)))::text || ' '::text) || (normalize_string((COALESCE((strasse)::text, ''::text))::character varying, (-2)))::text) || ' '::text) || (plz)::text) || ' '::text) || (normalize_string((COALESCE((ort)::text, ''::text))::character varying, (-3)))::text)))::character varying) gist_trgm_ops);

When I try to retrieve some addresses similar to a new address, I use the following query

SELECT pool_pk AS pool, adressnr_pk AS adrnr, vorname, name1,
    strasse, plz, ort, ratio_ld_adresse($1, $2, $3, $4, name1,
    strasse, plz, ort)::double precision AS ratio
FROM adressen.adresse
WHERE normalize_string(trim(normalize_string(coalesce(vorname::text, '')
    || ' ' || name1::text, -1) ||  ' ' ||
normalize_string(coalesce(strasse::text, ''), -2) || ' ' || plz::text ||
    ' ' || normalize_string(coalesce(ort::text, ''), -3))) %
    normalize_string(trim(normalize_string($1::text) ||  ' ' ||
    normalize_string(coalesce($2::text, ''), -2) || ' ' || $3::text ||
    ' ' || normalize_string(coalesce($4::text, ''), -3)))
    ORDER BY 1, 8 DESC, 2;

which means: take the normalized (lower case, no accents ...) parts of the address, concatinate them to
    <name> <street> <zip> <city>
and search for a similar address in the existing addresses. The described index 'trgm_adresse' is built on the same expression.

The function 'normalize_string' is written in plpythonu and doesn't use any database calls. The same with the function 'ratio_ld_adresse', which calculates the levenshtein distance for two entire addresses.

Most the time everything works fine and one search (in about 500,000 addresses) lasts about 2 to 5 seconds. But sometimes the search takes 50 or even 300 seconds.

We have two machines which have the same software installation (Ubuntu 14.10 server, Postgres 9.4.4) the production server has 4 GB memory and 2 processors and the test server 2 GB memory and 1 processor. Both are virtual machines on two different ESX-servers.

On both machines postgres was installed out of the box (apt-get ...) without configuration modifications (except network interfaces in pg_hba.conf). The test machine is a little bit slower but the very slow searches occur much more (~ 35 %) than on the production machine (~10 %).

An explain tells

QUERY PLAN
Sort  (cost=2227.31..2228.53 rows=489 width=65)
Sort Key: pool_pk, ((ratio_ld_adresse('Test 2'::character varying, 'Am Hang 12'::character varying, '12345'::character varying, 'Irgendwo'::character varying, name1, strasse, plz, ort))::double precision), adressnr_pk -> Index Scan using trgm_adresse on adresse (cost=1.43..2205.46 rows=489 width=65) Index Cond: ((normalize_string((btrim((((((((normalize_string((((COALESCE((vorname)::text, ''::text) || ' '::text) || (name1)::text))::character varying, (-1)))::text || ' '::text) || (normalize_string((COALESCE((strasse)::text, ''::text))::character varying, (-2)))::text) || ' '::text) || (plz)::text) || ' '::text) || (normalize_string((COALESCE((ort)::text, ''::text))::character varying, (-3)))::text)))::character varying, 0))::text % 'test 2 am hang 12 12345 irgendwo'::text)

which shows that the index is used and the result should arrive within some seconds (2228 is not very expensive).

When such a slow query is running, 'top' shows nearly '100 % wait' and 'iotop' shows 3 - 8 MB/sec disk read by a process
    postgres: vb vb 10.128.96.25(60435) FETCH

Also the postgres log, which was told to log every task longer than 5000 ms, shows

2015-09-02 13:44:48 CEST [25237-1] vb@vb LOG: duration: 55817.191 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0xa2d61f6c"

Since I never used a FETCH command in my life, this must be used by pg_trgm or something inside it (gin, gist etc.)

If during a slow Query one (or several) more instance(s) of the same query are started, all of them hang and return at the _same second_ some minutes later. Even if the other queries are on different addresses.

2015-08-31 09:09:00 GMT LOG: duration: 98630.958 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb780a07e10" 2015-08-31 09:09:00 GMT LOG: duration: 266887.136 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb780a95dd8" 2015-08-31 09:09:00 GMT LOG: duration: 170311.627 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb780a77e10" 2015-08-31 09:09:00 GMT LOG: duration: 72614.474 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb780a0ce10" 2015-08-31 09:09:00 GMT LOG: duration: 78561.131 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb780a08da0" 2015-08-31 09:09:00 GMT LOG: duration: 182392.792 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb78170c2b0" 2015-08-31 09:09:00 GMT LOG: duration: 245632.530 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb7809ddc50" 2015-08-31 09:09:00 GMT LOG: duration: 84760.400 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb7809f7dd8" 2015-08-31 09:09:00 GMT LOG: duration: 176402.352 ms execute <unnamed>: FETCH FORWARD 4096 IN "py:0x7fb7809fc668"

Does anyone have an idea, how to solve this problem?

regards Volker

--
Volker Böhm     Tel.: +49 4141 981155      www.vboehm.de
Voßkuhl 5       Fax:  +49 4141 981154
21682 Stade     mailto:volker@xxxxxxxxx



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