Re: Help with duration of statement: EXECUTE <unnamed> [PREPARE: COMMIT]

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On 10-10-18 11:02 AM, Tom Lane wrote:
Mladen Gogala<mladen.gogala@xxxxxxxxxxx>  writes:
Tom Lane wrote:
My guess would be overstressed disk subsystem.  A COMMIT doesn't require
much except fsync'ing the commit WAL record down to disk ...

Doesn't the "commit" statement also release all the locks held by the
transaction?

Yeah, and there's a nontrivial amount of other cleanup too, but it all
amounts to just changes in in-memory data structures.  I don't see that
taking five seconds, especially not if commits of similar transactions
usually take much less than that.

			regards, tom lane


Thanks for the info. The system is a QA system under load. It is running 200 jobs per minute, so yes the disk it stressed. Our application bundles PG into its install and installs the app and database all on the same filesystem. The QA folks probably have lots of logging turned on as well.

I am not sure what front-end client is doing the prepare/execute on a commit - I found it strange, I'm glad someone else does as well.

The web app is using jboss with connection pooling, but there is a scheduler built in C using libpq as well.

Thanks for the hint on deferred fk, I'll check, but I think if that was the case it would be happening much more often - like maybe almost all commits for this transaction type.

The OS is RH 5.2 64-bit, and I'm surprised they don't have iostat installed on it by default. There is vmstat. The load avg is

06:36:49 up 28 days, 15:20,  5 users,  load average: 19.44, 22.59, 22.50

Okay - I'm starting to see other stmts other than just commits taking longer than 5 secs sometimes as well now - stress test has been running for 3 days now...some commits 17 and 15 secs ouch...

2010-10-19 05:44:35 EDT [11760]: [10-1] LOG: duration: 17137.425 ms statement: commit 2010-10-19 05:44:36 EDT [10704]: [14-1] LOG: duration: 14928.903 ms statement: EXECUTE <unnamed> [PREPARE: COMMIT] 2010-10-19 05:44:36 EDT [12535]: [1-1] LOG: duration: 13241.032 ms statement: EXECUTE <unnamed> [PREPARE: update scheduled_job set active_filename=$1, active_state=$2, begin_time=$3, changed_by=$4, changed_on=$5, created_by=$6, created_on=$7, current_run=$8, deferred_time=$9, deleted=$10, end_time=$11, expire_at=$12, frequency_spec=$13, job_class=$14, contract_id=$15, job_name=$16, last_active_status_msg=$17, last_exit_code=$18, package_id=$19, perc_denominator=$20, perc_numerator=$21, retry_at=$22, scheduled_at=$23, scheduled_state=$24, start_at=$25, states_list=$26, timezone=$27, total_runs=$28 where id=$29] 2010-10-19 05:44:41 EDT [11760]: [11-1] LOG: duration: 6000.118 ms statement: commit 2010-10-19 05:44:49 EDT [10704]: [15-1] LOG: duration: 13804.450 ms statement: EXECUTE <unnamed> [PREPARE: COMMIT] 2010-10-19 05:44:49 EDT [12535]: [2-1] LOG: duration: 13807.317 ms statement: EXECUTE <unnamed> [PREPARE: COMMIT] 2010-10-19 05:45:00 EDT [11760]: [12-1] LOG: duration: 18879.010 ms statement: commit 2010-10-19 05:45:18 EDT [10704]: [16-1] LOG: duration: 28177.626 ms statement: EXECUTE <unnamed> [PREPARE: COMMIT] 2010-10-19 05:45:20 EDT [11760]: [13-1] LOG: duration: 19740.822 ms statement: commit 2010-10-19 05:45:20 EDT [13093]: [1-1] LOG: duration: 20828.412 ms statement: EXECUTE <unnamed> [PREPARE: COMMIT]


I do not have a vmstat to look at from when the stmts above executed, wish I did, here is vmstat 5, now but at this time everything is executing under 5 secs... procs -----------memory---------- ---swap-- -----io---- --system-- -----cpu------ r b swpd free buff cache si so bi bo in cs us sy id wa st 65 0 3232 340480 166812 2212884 0 0 0 1519 1676 50841 70 30 0 0 0 57 0 3232 273332 166856 2212796 0 0 0 1157 1609 52887 69 31 0 0 0 73 0 3232 320668 166884 2212668 0 0 0 781 1458 53420 70 30 0 0 0 44 0 3232 393240 166900 2213272 0 0 43 1336 1578 53155 70 30 0 0 0 42 0 3232 349176 166928 2213244 0 0 2 656 1449 52006 70 30 0 0 0 35 0 3232 299320 166972 2213436 0 0 3 1312 1582 51126 75 25 0 0 0 68 0 3232 265868 167012 2213420 0 0 0 739 1484 51982 74 26 0 0 0 42 0 3232 234672 167048 2212440 0 0 2 772 1550 50536 74 26 0 0 0 72 0 3232 252232 167080 2213004 0 0 0 1192 1616 48063 77 23 0 0 0 56 0 3232 336852 167112 2213220 0 0 0 699 1433 50655 78 22 0 0 0 38 0 3232 302212 167148 2213380 0 0 0 786 1578 49895 76 24 0 0 0 61 0 3232 381884 167180 2213260 0 0 6 943 1525 46474 77 23 0 0 0 66 0 3232 366568 167216 2213716 0 0 0 1150 1491 39232 82 18 0 0 0 93 0 3232 343792 167232 2213680 0 0 2 946 1504 39030 82 18 0 0 0 66 0 3232 377376 167268 2213260 0 0 0 954 1427 37206 84 16 0 0 0 60 0 3232 319552 167288 2212952 0 0 0 385 1365 34413 83 17 0 0 0 53 0 3232 320024 167400 2213184 0 0 2 3119 1576 33904 81 19 0 0 0 42 0 3232 256116 167432 2213716 0 0 0 1062 1501 32128 85 15 0 0 0 11 0 3232 783712 167480 2224604 0 0 2 3219 1499 33598 79 21 0 0 0 52 0 3232 828444 167520 2224668 0 0 3 1129 1429 40321 70 30 0 0 0 29 0 3232 933804 167548 2224828 0 0 8 1197 1384 37422 71 29 0 0 0 33 0 3232 974348 167560 2224956 0 0 0 1049 1438 34956 70 31 0 0 0 31 0 3232 941496 167588 2224956 0 0 0 716 1346 34662 68 32 0 0 0 40 0 3232 846540 167616 2225032 0 0 0 758 1426 35924 70 30 0 0 0


Something I just realized is they are running LVM as well - and I'm not very up on LVM - here is lvs output
lvs --aligned
  LV       VG         Attr   LSize   Origin Snap%  Move Log Copy%  Convert
  LogVol00 VolGroup00 -wi-ao 146.97G
  LogVol01 VolGroup00 -wi-ao   1.94G





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