Query: CPU Freq Framework

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Hi,
The System timer (Clock Source & ClockEvent) for our board is sharing the clock with CPU.On changing the CPU frequency using the CPU freq governors, we are changing the clock being fed to CPU and timers. This is affecting the kernel time keeping as the timer frequecy has been changed. What is the mechanism for managing this through the CPU freq/some other Linux Framework ?
 
Regards
Deepak
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