Re: Proposal draft for data checksumming for ext4

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On Thu, 20 Mar 2014 10:59:50 -0700, "Darrick J. Wong" <darrick.wong@xxxxxxxxxx> wrote:
> On Thu, Mar 20, 2014 at 05:40:06PM +0100, Lukáš Czerner wrote:
> > Hi all,
> > 
> > I've started thinking about implementing data checksumming for ext4 file
> > system. This is not meant to be a formal proposal or a definitive design
> > description since I am not that far yet, but just a few ideas to start
> > the discussion and trying to figure out what the best design for data
> > checksumming in ext4 might be.
> > 
> > 
> > 
> > 			   Data checksumming for ext4
> > 				  Version 0.1
> > 				 March 20, 2014
> > 
> > 
> > Goal
> > ====
> > 
> > The goal is to implement data checksumming for ext4 file system in order
> > to improve data integrity and increase protection against silent data
> > corruption while maintaining reasonable performance and usability of the
> > file system.
> > 
> > While data checksums can be certainly used in different ways, for example
> > data deduplication this proposal is very much focused on data integrity.
> > 
> > 
> > Checksum function
> > =================
> > 
> > By default I plan to use crc32c checksum, but I do not see a reason why not
> > not to be able to support different checksum function. Also by default the
> > checksum size should be 32 bits, but the plan is to make the format
> > flexible enough to be able to support different checksum sizes.
> 
> <nod> Were you thinking of allowing the use of different functions for data and
> metadata checksums?
> 
> > Checksumming and Validating
> > ===========================
> > 
> > On write checksums on the data blocks need to be computed right before its
> > bio is submitted and written out as metadata to its position (see bellow)
> > after the bio completes (similarly as we do unwritten extent conversion
> > today).
> > 
> > Similarly on read checksums needs to be computed after the bio completes
> > and compared with the stored values to verify that the data is intact.
> > 
> > All of this should be done using workqueues (Concurrency Managed
> > Workqueues) so we do not block the other operations and to spread the
> > checksum computation and comparison across CPUs. One wq for reads and one
> > for writes. Specific setup of the wq such as priority, or concurrency limits
> > should be decided later based on the performance evaluation.
> > 
> > While we already have ext4 infrastructure to submit bios in
> > fs/ext4/page-io.c where the entry point is ext4_bio_write_page() we would
> > need the same for reads to be able to provide ext4 specific hooks for
> > io completion.
> > 
> > 
> > Where to store the checksums
> > ============================
> > 
> > While the problems above are pretty straightforward when it comes to the
> > design, actually storing and retrieving the data checksums from to/from
> > the ext4 format requires much more thought to be efficient enough and play
> > nicely with the overall ext4 design while trying not to be too intrusive.
> > 
> > I came up with several ideas about where to store and how to access data
> > checksums. While some of the ideas might not be the most viable options,
> > it's still interesting to think about the advantages and disadvantages of
> > each particular solution.
> > 
> > a) Static layout
> > ----------------
> > 
> > This scheme fits perfectly into the ext4 design. Checksum blocks
> > would be preallocated the same way as we do with inode tables for example.
> > Each block group should have it's own contiguous region of checksum blocks
> > to be able to store checksums for bocks from entire block group it belongs
> > to. Each checksum block would contain header including checksum of the
> > checksum block.
Oh. The most thing that bother me about that feature is possible
performance degradation. number seeks increase dramatically because 
csumblock is not continuous with datablock. Off course journal should
absorb that and real io will happen during journal checkpoint.
But I assumes that mail server which does a lot of
create()/write()/fsync() will complain about bad performance.

BTW: it looks like we do not try to optimize io pattern inside
jbd2_log_do_checkpoint(). For example __flush_batch() can submit
buffer in sorted order(according to block numbers).
 
 
> > 
> > We still have unused 4 Bytes in the ext4_group_desc structure, so storing
> > a block number for the checksum table should not be a problem.
> 
> What if you have a 64bit filesystem?  Do you have some strategy in mind to work
> around that?  What about the snapshot exclusion bitmap field?  Afaict that
> never went in, so perhaps that field could be reused?
> 
> > Finding a checksum location of each block in the block group should be done
> > in O(1) time, which is very good. Other advantage is a locality with the
> > data blocks in question since both resides in the same block group.
> > 
> > Big disadvantage is the fact that this solution is not very flexibile which
> > comes from the fact that the location of "checksum table" is statically
> > located at a precise position in the file system at mkfs time.
> 
> Having a big dumb block of checksums would be easier to prefetch from disk for
> fsck and kernel driver, rather than having to dig through some tree structure.
> (More on that below)
> 
> > There are also other problems we should be concerned with. Ext4 file system
> > does have support for metadata checksumming so all the metadata does have
> > its own checksum. While we can avoid unnecessarily checksuming inodes, group
> > descriptors and basicall all statically positioned metadata, we still have
> > dynamically allocated metadata blocks such as extent blocks. These block
> > do not have to be checksummed but we would still have space reserved in the
> > checksum table.
> 
> Don't forget directory blocks--they (should) have checksums too, so you can
> skip those.
Just quick note: We can hide checksum for directory inside
ext4_dir_entry_2 for a special dirs '.' or '..' simply be increasing
->rec_len which make this feature compatible with older FS
> 
> I wonder, could we use this table to store backrefs too?  It would make the
> table considerably larger, but then we could (potentially) reconstruct broken
> extent trees.
> 
> > I think that we should be able to make this feature without introducing any
> > incompatibility, but it would make more sense to make it RO compatible only
> > so we can preserve the checksums. But that's up to the implementation.
> 
> I think you'd have to have it be rocompat, otherwise you could write data with
> an old kernel and a new kernel would freak out.
> 
> > b) Special inode
> > ----------------
> > 
> > This is very "lazy" solution and should not be difficult to implement. The
> > idea is to have a special inode which would store the checksum blocks in
> > it's own data blocks.
> > 
> > The big disadvantage is that we would have to walk the extent tree twice for
> > each read, or write. There is not much to say about this solution other than
> > again we can make this feature without introducing any incompatibility, but
> > it would probably make more sense to make it RO compatible to preserve the
> > checksums.
> > 
> > c) Per inode checksum b-tree
> > ----------------------------
> > 
> > See d)
> > 
> > d) Per block group checksum b-tree
> > ----------------------------------
> > 
> > Those two schemes are very similar in that both would store checksum in a
> > b-tree with a block number (we could use logical block number in per inode
> > tree) as a key. Obviously finding a checksum would be in logarithmic time,
> > while the size of the tree would be possibly much bigger in the per-inode
> > case. In per block group case we will have much smaller boundary of
> > number of checksum blocks stored.
> > 
> > This and the fact that we would have to have at least one checksum block
> > per inode (which would be wasteful in the case of small files) is making per
> > block group solution much more viable. However the major disadvantage of
> > per block group solution is that the checksum tree would create a source of
> > contention when reading/writing from/to a different inodes in the same block
> > group. This might be mitigated by having a worker thread per a range of block
> > groups - but it might still be a bottleneck.
> > 
> > Again we still have 4 Bytes in ext4_group_desc to store the pointer to the
> > root of the tree. While the ext4_inode structure have 4Bytes of
> > i_obso_faddr but that's not enough. So we would have to figure out where to
> > store it - we could possibly abuse i_block to store it along with the extent
> > nodes.
> 
> I think(?) your purpose in using either a special inode or a btree to store the
> checksums is to avoid wasting checksum blocks on things that are already
> checksummed?  I'm not sure that we'd save enough space to justify the extra
> processing.
> 
> --D
> 
> > File system scrub
> > =================
> > 
> > While this is certainly a feature which we want to have in both userspace
> > e2fsprogs and kernel I do not have any design notes at this stage.
> > 
> > 
> > 
> > 
> > I am sure that there are other possibilities and variants of those design
> > ideas, but I think that this should be enough to have a discussion started.
> > As I is not I think that the most viable option is d) that is, per block
> > group checksum tree, which gives us enough flexibility while not being too
> > complex solution.
> > 
> > I'll try to update this description as it will be getting more concrete
> > structure and I hope that we will have some productive discussion about
> > this at LSF.
> > 
> > Thanks!
> > -Lukas
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