[PATCH] Adding NAS Parallel Benchmarks (NPB) as client test

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This new autotest module implements a benchmark for parallel
processing (SMP) systems. Besides the traditional benchmarking,
some sanity checks are made, in order to test effectively the
SMP implementation of virtual machines. So this module at
the same time is a regular benchmark, but it can be also used
as a functional test for virtualization.

V3: Implemented suggestions made during review of the module.
    Binary diff removed, this is for the sake of documentation.

Signed-off-by: Cao, Chen <kcao@xxxxxxxxxx>
---
 client/tests/kvm/autotest_control/npb.control |   28 +++
 client/tests/kvm/kvm_tests.cfg.sample         |    4 +
 client/tests/npb/NPB3.3.tar.gz                |  Bin 0 -> 615658 bytes
 client/tests/npb/control                      |   28 +++
 client/tests/npb/enable-all-tests.patch       |  233 +++++++++++++++++++++++++
 client/tests/npb/npb.py                       |  145 +++++++++++++++
 6 files changed, 438 insertions(+), 0 deletions(-)
 create mode 100644 client/tests/kvm/autotest_control/npb.control
 create mode 100644 client/tests/npb/NPB3.3.tar.gz
 create mode 100644 client/tests/npb/control
 create mode 100644 client/tests/npb/enable-all-tests.patch
 create mode 100644 client/tests/npb/npb.py

diff --git a/client/tests/kvm/autotest_control/npb.control b/client/tests/kvm/autotest_control/npb.control
new file mode 100644
index 0000000..2a8a8bb
--- /dev/null
+++ b/client/tests/kvm/autotest_control/npb.control
@@ -0,0 +1,28 @@
+NAME = "NAS Parallel Benchmarks"
+AUTHOR = "Cao, Chen <kcao@xxxxxxxxxx>"
+TEST_TYPE = "CLIENT"
+TEST_CLASS = "HARDWARE"
+TEST_CATEGORY = "BENCHMARK"
+TIME = "MEDIUM"
+DOC = """\
+Using NPB, OpenMP implementation.
+
+See http://www.nas.nasa.gov/Software/NPB/
+"""
+
+# Supported tests (benchmarks):
+#   bt.A bt.B bt.C bt.D bt.E bt.S bt.W
+#   cg.A cg.B cg.C cg.S cg.W
+#   dc.A dc.B dc.S dc.W
+#   ep.A ep.B ep.C ep.D ep.E ep.S ep.W
+#   ft.A ft.B ft.S ft.W
+#   is.A is.B is.C is.S is.W
+#   lu.A lu.B lu.C lu.S lu.W
+#   mg.A mg.B mg.S mg.W
+#   sp.A sp.B sp.C sp.D sp.E sp.S sp.W
+#   ua.A ua.B ua.C ua.S ua.W
+#
+# Please refer to npb.py for more infomation about
+# the arguments.
+job.run_test(url='npb', tests='ep.A ep.B')
+
diff --git a/client/tests/kvm/kvm_tests.cfg.sample b/client/tests/kvm/kvm_tests.cfg.sample
index ceda7b3..fa4dd12 100644
--- a/client/tests/kvm/kvm_tests.cfg.sample
+++ b/client/tests/kvm/kvm_tests.cfg.sample
@@ -96,6 +96,9 @@ variants:
                 # control file and set this timeout appropriately.
                 test_timeout = 3900
                 test_control_file = cerberus.control
+            - npb:
+                test_name = npb
+                test_control_file = npb.control
 
     - linux_s3:     install setup
         type = linux_s3
@@ -639,6 +642,7 @@ linux_s3:
 
 variants:
     - @up:
+        no autotest.npb
     - smp2:
         extra_params += " -smp 2"
diff --git a/client/tests/npb/control b/client/tests/npb/control
new file mode 100644
index 0000000..bebd0e9
--- /dev/null
+++ b/client/tests/npb/control
@@ -0,0 +1,28 @@
+NAME = "NAS Parallel Benchmarks"
+AUTHOR = "Cao, Chen <kcao@xxxxxxxxxx>"
+TEST_TYPE = "CLIENT"
+TEST_CLASS = "HARDWARE"
+TEST_CATEGORY = "BENCHMARK"
+TIME = "MEDIUM"
+DOC = """\
+Using NPB, OpenMP implementation.
+
+See http://www.nas.nasa.gov/Software/NPB/
+"""
+
+# Supported tests (benchmarks):
+#   bt.A bt.B bt.C bt.D bt.E bt.S bt.W
+#   cg.A cg.B cg.C cg.S cg.W
+#   dc.A dc.B dc.S dc.W
+#   ep.A ep.B ep.C ep.D ep.E ep.S ep.W
+#   ft.A ft.B ft.S ft.W
+#   is.A is.B is.C is.S is.W
+#   lu.A lu.B lu.C lu.S lu.W
+#   mg.A mg.B mg.S mg.W
+#   sp.A sp.B sp.C sp.D sp.E sp.S sp.W
+#   ua.A ua.B ua.C ua.S ua.W
+#
+# Please refer to npb.py for more infomation about
+# the arguments.
+job.run_test(url='npb', tests='ep.A ep.B bt.S bt.W')
+
diff --git a/client/tests/npb/enable-all-tests.patch b/client/tests/npb/enable-all-tests.patch
new file mode 100644
index 0000000..f08a9d3
--- /dev/null
+++ b/client/tests/npb/enable-all-tests.patch
@@ -0,0 +1,233 @@
+diff --git a/NPB3.3-OMP/config/make.def b/NPB3.3-OMP/config/make.def
+new file mode 100644
+index 0000000..afffe7d
+--- /dev/null
++++ b/NPB3.3-OMP/config/make.def
+@@ -0,0 +1,161 @@
++#---------------------------------------------------------------------------
++#
++#                SITE- AND/OR PLATFORM-SPECIFIC DEFINITIONS. 
++#
++#---------------------------------------------------------------------------
++
++#---------------------------------------------------------------------------
++# Items in this file will need to be changed for each platform.
++#---------------------------------------------------------------------------
++
++#---------------------------------------------------------------------------
++# Parallel Fortran:
++#
++# For CG, EP, FT, MG, LU, SP, BT and UA, which are in Fortran, the following 
++# must be defined:
++#
++# F77        - Fortran compiler
++# FFLAGS     - Fortran compilation arguments
++# F_INC      - any -I arguments required for compiling Fortran 
++# FLINK      - Fortran linker
++# FLINKFLAGS - Fortran linker arguments
++# F_LIB      - any -L and -l arguments required for linking Fortran 
++# 
++# compilations are done with $(F77) $(F_INC) $(FFLAGS) or
++#                            $(F77) $(FFLAGS)
++# linking is done with       $(FLINK) $(F_LIB) $(FLINKFLAGS)
++#---------------------------------------------------------------------------
++
++#---------------------------------------------------------------------------
++# This is the fortran compiler used for Fortran programs
++#---------------------------------------------------------------------------
++F77 = gfortran
++# This links fortran programs; usually the same as ${F77}
++FLINK	= $(F77)
++
++#---------------------------------------------------------------------------
++# These macros are passed to the linker 
++#---------------------------------------------------------------------------
++F_LIB  =
++
++#---------------------------------------------------------------------------
++# These macros are passed to the compiler 
++#---------------------------------------------------------------------------
++F_INC =
++
++#---------------------------------------------------------------------------
++# Global *compile time* flags for Fortran programs
++#---------------------------------------------------------------------------
++FFLAGS	= -O -fopenmp 
++
++#---------------------------------------------------------------------------
++# Global *link time* flags. Flags for increasing maximum executable 
++# size usually go here. 
++#---------------------------------------------------------------------------
++FLINKFLAGS = -O -fopenmp 
++
++
++#---------------------------------------------------------------------------
++# Parallel C:
++#
++# For IS and DC, which are in C, the following must be defined:
++#
++# CC         - C compiler 
++# CFLAGS     - C compilation arguments
++# C_INC      - any -I arguments required for compiling C 
++# CLINK      - C linker
++# CLINKFLAGS - C linker flags
++# C_LIB      - any -L and -l arguments required for linking C 
++#
++# compilations are done with $(CC) $(C_INC) $(CFLAGS) or
++#                            $(CC) $(CFLAGS)
++# linking is done with       $(CLINK) $(C_LIB) $(CLINKFLAGS)
++#---------------------------------------------------------------------------
++
++#---------------------------------------------------------------------------
++# This is the C compiler used for C programs
++#---------------------------------------------------------------------------
++CC = cc
++# This links C programs; usually the same as ${CC}
++CLINK	= $(CC)
++
++#---------------------------------------------------------------------------
++# These macros are passed to the linker 
++#---------------------------------------------------------------------------
++C_LIB  = -lm
++
++#---------------------------------------------------------------------------
++# These macros are passed to the compiler 
++#---------------------------------------------------------------------------
++C_INC =
++
++#---------------------------------------------------------------------------
++# Global *compile time* flags for C programs
++# DC inspects the following flags (preceded by "-D"):
++#
++# IN_CORE - computes all views and checksums in main memory (if there is 
++# enough memory)
++#
++# VIEW_FILE_OUTPUT - forces DC to write the generated views to disk
++#
++# OPTIMIZATION - turns on some nonstandard DC optimizations
++#
++# _FILE_OFFSET_BITS=64 
++# _LARGEFILE64_SOURCE - are standard compiler flags which allow to work with 
++# files larger than 2GB.
++#---------------------------------------------------------------------------
++CFLAGS	= -O
++
++#---------------------------------------------------------------------------
++# Global *link time* flags. Flags for increasing maximum executable 
++# size usually go here. 
++#---------------------------------------------------------------------------
++CLINKFLAGS = -O
++
++
++#---------------------------------------------------------------------------
++# Utilities C:
++#
++# This is the C compiler used to compile C utilities.  Flags required by 
++# this compiler go here also; typically there are few flags required; hence 
++# there are no separate macros provided for such flags.
++#---------------------------------------------------------------------------
++UCC	= cc
++
++
++#---------------------------------------------------------------------------
++# Destination of executables, relative to subdirs of the main directory. . 
++#---------------------------------------------------------------------------
++BINDIR	= ../bin
++
++
++#---------------------------------------------------------------------------
++# The variable RAND controls which random number generator 
++# is used. It is described in detail in README.install. 
++# Use "randi8" unless there is a reason to use another one. 
++# Other allowed values are "randi8_safe", "randdp" and "randdpvec"
++#---------------------------------------------------------------------------
++RAND   = randi8
++# The following is highly reliable but may be slow:
++# RAND   = randdp
++
++
++#---------------------------------------------------------------------------
++# The variable WTIME is the name of the wtime source code module in the
++# common directory.  
++# For most machines,       use wtime.c
++# For SGI power challenge: use wtime_sgi64.c
++#---------------------------------------------------------------------------
++WTIME  = wtime.c
++
++
++#---------------------------------------------------------------------------
++# Enable if either Cray (not Cray-X1) or IBM: 
++# (no such flag for most machines: see common/wtime.h)
++# This is used by the C compiler to pass the machine name to common/wtime.h,
++# where the C/Fortran binding interface format is determined
++#---------------------------------------------------------------------------
++# MACHINE	=	-DCRAY
++# MACHINE	=	-DIBM
++
++
+diff --git a/NPB3.3-OMP/config/suite.def b/NPB3.3-OMP/config/suite.def
+new file mode 100644
+index 0000000..7342195
+--- /dev/null
++++ b/NPB3.3-OMP/config/suite.def
+@@ -0,0 +1,60 @@
++# config/suite.def
++# This file is used to build several benchmarks with a single command. 
++# Typing "make suite" in the main directory will build all the benchmarks
++# specified in this file. 
++# Each line of this file contains a benchmark name and the class.
++# The name is one of "cg", "is", "dc", "ep", mg", "ft", "sp",
++#  "bt", "lu", and "ua". 
++# The class is one of "S", "W", "A" through "E" 
++# (except that no classes C,D,E for DC and no class E for IS and UA).
++# No blank lines. 
++# The following example builds sample sizes of all benchmarks. 
++ft	A
++ft	B
++ft	S
++ft	W
++mg	A
++mg	B
++mg	S
++mg	W
++sp	A
++sp	B
++sp	C
++sp	S
++sp	W
++lu	A
++lu	B
++lu	C
++lu	S
++lu	W
++bt	A
++bt	B
++bt	C
++bt	S
++bt	W
++is	A
++is	B
++is	C
++is	S
++is	W
++ep	A
++ep	B
++ep	C
++ep	D
++ep	E
++ep	S
++ep	W
++cg	A
++cg	B
++cg	C
++cg	S
++cg	W
++ua	A
++ua	B
++ua	C
++ua	S
++ua	W
++dc	A
++dc	B
++dc	S
++dc	W
diff --git a/client/tests/npb/npb.py b/client/tests/npb/npb.py
new file mode 100644
index 0000000..09b787e
--- /dev/null
+++ b/client/tests/npb/npb.py
@@ -0,0 +1,145 @@
+import os, shutil, logging, re
+from autotest_lib.client.bin import test, utils
+from autotest_lib.client.common_lib import error
+
+class npb(test.test):
+    """
+    This module runs the NAS Parallel Benchmarks on the client machine
+
+    @note: Since we use gfortran to complie these benchmarks, this test might
+            not be able to run on older Operating Systems.
+    @see: http://www.nas.nasa.gov/Resources/Software/npb.html
+    """
+    version = 1
+    def initialize(self, tests=''):
+        # Initialize failure counter
+        self.n_fail = 0
+        # Get the parameters for run_once()
+        self.tests = tests
+        # Ratio is the reason between 1 and the number of CPUs of the system.
+        self.ratio = 1.0 / utils.count_cpus()
+        logging.debug('Ratio (1/n_cpus) found for this system: %s' % self.ratio)
+
+
+    def setup(self, tarball='NPB3.3.tar.gz'):
+        tarball = utils.unmap_url(self.bindir, tarball, self.tmpdir)
+        utils.extract_tarball_to_dir(tarball, self.srcdir)
+        os.chdir(self.srcdir)
+        # Prepare the makefile and benchmarks to generate.
+        utils.system('patch -p1 < ../enable-all-tests.patch')
+        utils.system('cd NPB3.3-OMP && make suite')
+
+
+    def run_once(self):
+        """
+        Run each benchmark twice, with different number of threads.
+
+        A sanity check is made on each benchmark executed:
+        The ratio between the times
+        time_ratio = time_one_thrd / time_full_thrds
+
+        Has to be contained inside an envelope:
+        upper_bound = full_thrds * (1 + (1/n_cpus))
+        lower_bound = full_thrds * (1 - (1/n_cpus))
+
+        Otherwise, we throw an exception (this test might be running under a
+        virtual machine and sanity check failure might mean bugs on smp
+        implementation).
+        """
+        os.chdir(self.srcdir)
+
+        # get the tests to run
+        test_list = self.tests.split()
+
+        if len(test_list) == 0:
+            raise error.TestError('No tests (benchmarks) provided. Exit.')
+
+        for itest in test_list:
+            itest_cmd = os.path.join('NPB3.3-OMP/bin/', itest)
+            try:
+                itest = utils.run(itest_cmd)
+            except:
+                logging.error('NPB benchmark %s has failed. Output: %s',
+                              itest_cmd, itest.stdout)
+                self.n_fail += 1
+            logging.debug(itest.stdout)
+
+            # Get the number of threads that the test ran
+            # (which is supposed to be equal to the number of system cores)
+            m = re.search('Total threads\s*=\s*(.*)\n', itest.stdout)
+
+            # Gather benchmark results
+            ts = re.search('Time in seconds\s*=\s*(.*)\n', itest.stdout)
+            mt = re.search('Mop/s total\s*=\s*(.*)\n', itest.stdout)
+            mp = re.search('Mop/s/thread\s*=\s*(.*)\n', itest.stdout)
+
+            time_seconds = float(ts.groups()[0])
+            mops_total = float(mt.groups()[0])
+            mops_per_thread = float(mp.groups()[0])
+
+            logging.info('Test: %s', itest_cmd)
+            logging.info('Time (s): %s', time_seconds)
+            logging.info('Total operations executed (mops/s): %s', mops_total)
+            logging.info('Total operations per thread (mops/s/thread): %s',
+                          mops_per_thread)
+
+            self.write_test_keyval({'test': itest_cmd})
+            self.write_test_keyval({'time_seconds': time_seconds})
+            self.write_test_keyval({'mops_total': mops_total})
+            self.write_test_keyval({'mops_per_thread': mops_per_thread})
+
+            # A little extra sanity check comes handy
+            if int(m.groups()[0]) != utils.count_cpus():
+                raise error.TestError("NPB test suite evaluated the number "
+                                      "of threads incorrectly: System appears "
+                                      "to have %s cores, but %s threads were "
+                                      "executed.")
+
+            # We will use this integer with float point vars later.
+            full_thrds = float(m.groups()[0])
+
+            # get duration for full_threads running.
+            m = re.search('Time in seconds\s*=\s*(.*)\n', itest.stdout)
+            time_full_thrds = float(m.groups()[0])
+
+            # repeat the execution with single thread.
+            itest_single_cmd = ''.join(['OMP_NUM_THREADS=1 ', itest_cmd])
+            try:
+                itest_single = utils.run(itest_single_cmd)
+            except:
+                logging.error('NPB benchmark single thread %s has failed. '
+                              'Output: %s',
+                              itest_single_cmd,
+                              itest_single.stdout)
+                self.n_fail += 1
+
+            m = re.search('Time in seconds\s*=\s*(.*)\n', itest_single.stdout)
+            time_one_thrd = float(m.groups()[0])
+
+            # check durations
+            ratio = self.ratio
+            time_ratio = float(time_one_thrd / time_full_thrds)
+            upper_bound = full_thrds * (1 + ratio)
+            lower_bound = full_thrds * (1 - ratio)
+            logging.debug('Time ratio for %s: %s', itest_cmd, time_ratio)
+            logging.debug('Upper bound: %s', upper_bound)
+            logging.debug('Lower bound: %s', lower_bound)
+
+            violates_upper_bound = time_ratio > upper_bound
+            violates_lower_bound = time_ratio < lower_bound
+            if violates_upper_bound or violates_lower_bound:
+                logging.error('NPB benchmark %s failed sanity check '
+                              '- time ratio outside bounds' % itest_cmd)
+                self.n_fail += 1
+            else:
+                logging.debug('NPB benchmark %s sanity check PASS' % itest_cmd)
+
+
+    def cleanup(self):
+        """
+        Raise TestError if failures were detected during test execution.
+        """
+        if self.n_fail != 0:
+            raise error.TestError('NPB test failed.')
+        else:
+            logging.info('NPB test passed.')
-- 
1.6.2.5

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