Re: Gluster very poor performance when copying small files (1x (2+1) = 3, SSD)

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On 3/19/2018 5:42 AM, Ondrej Valousek wrote:
Removing NFS or NFS Ganesha from the equation, not very impressed on my own setup either. For the writes it's doing, that's alot of CPU usage in top. Seems bottle-necked via a single execution core somewhere trying to facilitate read / writes to the other bricks.

Writes to the gluster FS from within one of the gluster participating bricks:

[root@nfs01 n]# dd if=/dev/zero of=./some-file.bin

393505+0 records in
393505+0 records out
201474560 bytes (201 MB) copied, 50.034 s, 4.0 MB/s

[root@nfs01 n]#

Top results (10 second average)won't go over 32%:

top - 00:49:38 up 21:39,  2 users,  load average: 0.42, 0.24, 0.19
Tasks: 164 total,   1 running, 163 sleeping,   0 stopped,   0 zombie
%Cpu0 : 29.3 us, 24.7 sy, 0.0 ni, 45.1 id, 0.0 wa, 0.0 hi, 0.8 si, 0.0 st %Cpu1 : 27.2 us, 24.1 sy, 0.0 ni, 47.2 id, 0.0 wa, 0.0 hi, 1.5 si, 0.0 st %Cpu2 : 20.2 us, 13.5 sy, 0.0 ni, 64.1 id, 0.0 wa, 0.0 hi, 2.3 si, 0.0 st %Cpu3 : 30.0 us, 16.2 sy, 0.0 ni, 47.5 id, 0.0 wa, 0.0 hi, 6.3 si, 0.0 st
KiB Mem :  3881708 total,  3207488 free,   346680 used,   327540 buff/cache
KiB Swap:  4063228 total,  4062828 free,      400 used.  3232208 avail Mem

   PID USER      PR  NI    VIRT    RES    SHR S %CPU %MEM     TIME+ COMMAND
1319 root 20 0 819036 12928 4036 S 32.3 0.3 1:19.64 glusterfs 1310 root 20 0 1232428 25636 4364 S 12.1 0.7 0:41.25 glusterfsd


Next, the same write but directly to the brick via XFS, which of course is faster:


top - 09:45:09 up 1 day,  6:34,  3 users,  load average: 0.61, 1.01, 1.04
Tasks: 171 total,   2 running, 169 sleeping,   0 stopped,   0 zombie
%Cpu0 : 0.6 us, 2.1 sy, 0.0 ni, 82.6 id, 14.5 wa, 0.0 hi, 0.2 si, 0.0 st %Cpu1 : 16.7 us, 83.3 sy, 0.0 ni, 0.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu2 : 0.4 us, 0.9 sy, 0.0 ni, 94.2 id, 4.4 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu3 : 1.1 us, 0.6 sy, 0.0 ni, 98.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st
KiB Mem :  3881708 total,   501120 free,   230704 used,  3149884 buff/cache
KiB Swap:  4063228 total,  3876896 free,   186332 used.  3343960 avail Mem

  PID USER      PR  NI    VIRT    RES    SHR S %CPU %MEM     TIME+ COMMAND
14691 root      20   0  107948    608    512 R 25.0  0.0   0:34.29 dd
1334 root 20 0 2694264 61076 2228 S 2.7 1.6 283:55.96 ganesha.nfsd


The result of a dd command directly against the brick FS itself is of course much better:


[root@nfs01 gv01]# dd if=/dev/zero of=./some-file.bin
5771692+0 records in
5771692+0 records out
2955106304 bytes (3.0 GB) copied, 35.3425 s, 83.6 MB/s

[root@nfs01 gv01]# pwd
/bricks/0/gv01
[root@nfs01 gv01]#

Tried a few tweak options with no effect:

[root@nfs01 glusterfs]# gluster volume info

Volume Name: gv01
Type: Replicate
Volume ID: e5ccc75e-5192-45ac-b410-a34ebd777666
Status: Started
Snapshot Count: 0
Number of Bricks: 1 x 2 = 2
Transport-type: tcp
Bricks:
Brick1: nfs01:/bricks/0/gv01
Brick2: nfs02:/bricks/0/gv01
Options Reconfigured:
cluster.server-quorum-type: server
cluster.quorum-type: auto
server.event-threads: 8
client.event-threads: 8
performance.readdir-ahead: on
performance.write-behind-window-size: 8MB
performance.io-thread-count: 16
performance.cache-size: 1GB
nfs.trusted-sync: on
performance.client-io-threads: off
nfs.disable: on
transport.address-family: inet
[root@nfs01 glusterfs]#

That's despite that I can confirm doing 90+ MB/s on my 1Gbe network. Thoughts?

--
Cheers,
Tom K.
-------------------------------------------------------------------------------------

Living on earth is expensive, but it includes a free trip around the sun.


Hi,
As I posted in my previous emails - glusterfs can never match NFS (especially async one) performance of small files/latency. That's given by the design.
Nothing you can do about it.
Ondrej

-----Original Message-----
From: gluster-users-bounces@xxxxxxxxxxx [mailto:gluster-users-bounces@xxxxxxxxxxx] On Behalf Of Rik Theys
Sent: Monday, March 19, 2018 10:38 AM
To: gluster-users@xxxxxxxxxxx; mailinglists@xxxxxxxxxxx
Subject: Re:  Gluster very poor performance when copying small files (1x (2+1) = 3, SSD)

Hi,

I've done some similar tests and experience similar performance issues (see my 'gluster for home directories?' thread on the list).

If I read your mail correctly, you are comparing an NFS mount of the brick disk against a gluster mount (using the fuse client)?

Which options do you have set on the NFS export (sync or async)?

 From my tests, I concluded that the issue was not bandwidth but latency.
Gluster will only return an IO operation once all bricks have confirmed that the data is on disk. If you are using a fuse mount, you might compare with using the 'direct-io-mode=disable' option on the client might help (no experience with this).

In our tests, I've used NFS-ganesha to serve the gluster volume over NFS. This makes things even worse as NFS-ganesha has no "async" mode, which makes performance terrible.

If you find a magic knob to make glusterfs fast on small-file workloads, do let me know!

Regards,

Rik

On 03/18/2018 11:13 PM, Sam McLeod wrote:
Howdy all,

We're experiencing terrible small file performance when copying or
moving files on gluster clients.

In the example below, Gluster is taking 6mins~ to copy 128MB / 21,000
files sideways on a client, doing the same thing on NFS (which I know
is a totally different solution etc. etc.) takes approximately 10-15
seconds(!).

Any advice for tuning the volume or XFS settings would be greatly
appreciated.

Hopefully I've included enough relevant information below.


## Gluster Client

root@gluster-client:/mnt/gluster_perf_test/  # du -sh .
127M    .
root@gluster-client:/mnt/gluster_perf_test/  # find . -type f | wc -l
21791
root@gluster-client:/mnt/gluster_perf_test/  # du 9584toto9584.txt
4    9584toto9584.txt


root@gluster-client:/mnt/gluster_perf_test/  # time cp -a private
private_perf_test

real    5m51.862s
user    0m0.862s
sys    0m8.334s

root@gluster-client:/mnt/gluster_perf_test/ # time rm -rf
private_perf_test/

real    0m49.702s
user    0m0.087s
sys    0m0.958s


## Hosts

- 16x Intel(R) Xeon(R) CPU E5-2680 v4 @ 2.40GHz per Gluster host /
client
- Storage: iSCSI provisioned (via 10Gbit DAC/Fibre), SSD disk, 50K
R/RW 4k IOP/s, 400MB/s per Gluster host
- Volumes are replicated across two hosts and one arbiter only host
- Networking is 10Gbit DAC/Fibre between Gluster hosts and clients
- 18GB DDR4 ECC memory

## Volume Info

root@gluster-host-01:~ # gluster pool list UUID          Hostname
State ad02970b-e2aa-4ca8-998c-bd10d5970faa  gluster-host-02.fqdn
Connected ea116a94-c19e-48db-b108-0be3ae622e2e  gluster-host-03.fqdn
Connected
2e855c25-e7ac-4ff6-be85-e8bcc6f45ee4  localhost Connected

root@gluster-host-01:~ # gluster volume info uat_storage

Volume Name: uat_storage
Type: Replicate
Volume ID: 7918f1c5-5031-47b8-b054-56f6f0c569a2
Status: Started
Snapshot Count: 0
Number of Bricks: 1 x (2 + 1) = 3
Transport-type: tcp
Bricks:
Brick1: gluster-host-01.fqdn:/mnt/gluster-storage/uat_storage
Brick2: gluster-host-02.fqdn:/mnt/gluster-storage/uat_storage
Brick3: gluster-host-03.fqdn:/mnt/gluster-storage/uat_storage
(arbiter) Options Reconfigured:
performance.rda-cache-limit: 256MB
network.inode-lru-limit: 50000
server.outstanding-rpc-limit: 256
performance.client-io-threads: true
nfs.disable: on
transport.address-family: inet
client.event-threads: 8
cluster.eager-lock: true
cluster.favorite-child-policy: size
cluster.lookup-optimize: true
cluster.readdir-optimize: true
cluster.use-compound-fops: true
diagnostics.brick-log-level: ERROR
diagnostics.client-log-level: ERROR
features.cache-invalidation-timeout: 600
features.cache-invalidation: true
network.ping-timeout: 15
performance.cache-invalidation: true
performance.cache-max-file-size: 6MB
performance.cache-refresh-timeout: 60
performance.cache-size: 1024MB
performance.io <http://performance.io>-thread-count: 16
performance.md-cache-timeout: 600
performance.stat-prefetch: true
performance.write-behind-window-size: 256MB
server.event-threads: 8
transport.listen-backlog: 2048

root@gluster-host-01:~ # xfs_info /dev/mapper/gluster-storage-unlocked
meta-data=/dev/mapper/gluster-storage-unlocked isize=512    agcount=4,
agsize=196607360 blks
          =                       sectsz=512   attr=2, projid32bit=1
          =                       crc=1        finobt=0 spinodes=0 data
=                       bsize=4096   blocks=786429440, imaxpct=5
          =                       sunit=0      swidth=0 blks naming
=version 2              bsize=8192   ascii-ci=0 ftype=1 log
=internal               bsize=4096   blocks=383998, version=2
          =                       sectsz=512   sunit=0 blks,
lazy-count=1 realtime =none                   extsz=4096   blocks=0,
rtextents=0


--
Sam McLeod (protoporpoise on IRC)
https://smcleod.net
https://twitter.com/s_mcleod

Words are my own opinions and do not necessarily represent those of my
employer or partners.



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--
Rik Theys
System Engineer
KU Leuven - Dept. Elektrotechniek (ESAT) Kasteelpark Arenberg 10 bus 2440  - B-3001 Leuven-Heverlee
+32(0)16/32.11.07
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--
Cheers,
Tom K.
-------------------------------------------------------------------------------------

Living on earth is expensive, but it includes a free trip around the sun.

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