We use --filter=blob:none to clone our large monorepo. After a while we started getting reports from engineers complaining that their local repository was broken. Upon further investigation, we found that broken repositories are missing objects that created in that particular local repository. git fsck reports "bad object: xxx". Here are the minimal steps to recreate issue. # create a normal git repo, add one file and push to remote mkdir full && cd full && git init && touch foo git add foo && git commit -m "commit 1" && git push # partial clone a copy of the repo we just created cd .. git clone git@xxxxxxxxxxx:example/foo.git --filter=blob:none partial # create a commit in partial cloned repo and push it to remote cd partial && echo 'hello' > foo && git commit -a -m "commit 2" git push # run gc in partial repo git gc --prune=now # in normal git repo, create another commit on top of the # commit we created in partial repo cd ../full && git pull && echo ' world' >> foo git commit -a -m "commit 3" && git push # pull from remote in partial repo, and run gc again cd ../partial && git pull && git gc --prune=now The last `git gc` will error out on fsck with error message like this: error: Could not read d3fbfea9e448461c2b72a79a95a220ae10defd94 error: Could not read d3fbfea9e448461c2b72a79a95a220ae10defd94 Note that disabling commit graph on the partial repo will cause `git gc` to exit normally, but will still not solve the underlying problem. And in more complex situations, disabling commit graph will not avoid the error. The problem is caused by the wrong result returned by setup_revision with `--exclude-promisor-objects` enabled. `git gc` will call `git repack`, which will call `git pack-objects` twice on a partially cloned repo. The first call to pack-objects combines all the promisor packfiles, and the second pack-objects command packs all reachable non-promisor objects into a normal packfile. However, a bug in setup_revision caused some non-promisor objects to be mistakenly marked as in promisor packfiles in the second call to pack-objects. These incorrectly marked objects are never repacked, and were deleted from the object store as a result. In revision.c, `process_parents()` recursively marks commit parents as UNINTERESTING if the commit itself is UNINTERESTING. `--exclude-promisor-objects` is implemented as "iterate all objects in promisor packfiles, mark them as UNINTERESTING". So when we find a commit object in a promisor packfile, we also set its ancestors as UNINTERESTING, whether the ancestor is a promisor object or not. In the example above, "commit 2" is a normal commit object, living in a normal packfile, but marked as a promisor object and gc'ed from the object store. Han Young (1): revision: don't set parents as uninteresting if exclude promisor revision.c | 2 +- t/t0410-partial-clone.sh | 22 +++++++++++++++++++++- 2 files changed, 22 insertions(+), 2 deletions(-) -- 2.46.0.rc0.107.gae139121ac.dirty