Hi, I have observed incorret behaviour of git-commit after git-add -u, where it records deletions of files not related to the files touched by commit. Unfortunately, I was not able to create a small reproducer, and so describing the reproducer with the codebase I've encountered this. Fortunately, it's an open-source project, so I've uploaded the tree to repo.or.cz. I've reproduced the problem with both 1.5.3-rc5 and 1.5.2.4 The problematic commit is the topmost one, so it is needed to reset it to reproduce the bug. The commit moves files: vm/em/src/ia32 => vm/em/src/arch/ia32 vm/vmcore/src/util/em64t => vm/em/src/arch/em64t vm/vmcore/src/util/ipf => vm/em/src/arch/ipf Problem description (short): Sequence of commands git-add -u git-commit produces severely damaged commit. If 'git-add -u' is changed to using git-add and git-rm, the commit is correct. How to reproduce (long): $ git clone git://repo.or.cz/drlvm.git $ cd drlvm $ git reset HEAD^ # undo the problematic commit $ git status # all is good now ... # Changed but not updated: ... # deleted: vm/em/src/ia32/... ... # deleted: vm/vmcore/src/util/em64t/... ... # deleted: vm/vmcore/src/util/ipf/... ... # Untracked files: ... # vm/em/src/arch/ $ git add vm/em/src/arch/ # inform git about added files $ git status # still good... ... # Changes to be committed: ... # new file: vm/em/src/arch/... ... # Changed but not updated: ... # deleted: vm/em/src/ia32/... ... # deleted: vm/vmcore/src/util/em64t/... ... # deleted: vm/vmcore/src/util/ipf/... ... $ git add -u # inform git about deleted files as well $ git status # output is okay, it looks like git picked up all of the moves, but ... ... # Changed but not updated: # renamed: vm/vmcore/src/util/em64t/... -> vm/em/src/arch/em64t/... ... $ git diff # is empty as expected $ git diff -M --cached # shows a bunch of renames as expected $ git commit -m "move" # BANG! something gone wrong: Created commit 64aed27: move 53 files changed, 23168 insertions(+), 5414 deletions(-) create mode 100644 vm/em/src/arch/... ... # file creations are okay delete mode 100644 vm/vmi/Makefile # these deletions are incorrect delete mode 100644 vm/vmi/src/j9vmls.cpp delete mode 100644 vm/vmi/src/vm_trace.h delete mode 100644 vm/vmi/src/vmi.cpp delete mode 100644 vm/vmi/src/vmi.exp delete mode 100644 vm/vmstart/src/compmgr/component_manager_impl.cpp delete mode 100644 vm/vmstart/src/compmgr/component_manager_impl.h $ git status # work dir is expected to be clean, but it is not # Changes to be committed: ... # deleted: vm/vmcore/src/util/em64t/... ... # new file: vm/vmi/Makefile # new file: vm/vmi/src/j9vmls.cpp # renamed: vm/vmcore/src/util/em64t/base_natives/java_lang_thread_em64t.cpp -> vm/vmi/src/vm_trace.h # new file: vm/vmi/src/vmi.cpp # new file: vm/vmi/src/vmi.exp # new file: vm/vmstart/src/compmgr/component_manager_impl.cpp # new file: vm/vmstart/src/compmgr/component_manager_impl.h So it does not committed deletion of moved files, but instead recorded deletions of some other arbitrary files, which in fact are still intact in the tree, and now are reported as new. Alternative sequence of commands, not involving 'git-add -u' produces correct results (without output for compactness) $ git add vm/em $ git rm -r vm/vmcore/src/util/ipf $ git rm -r vm/vmcore/src/util/em64t $ git rm -r vm/em/src/ia32 $ git status # On branch master nothing to commit (working directory clean) - To unsubscribe from this list: send the line "unsubscribe git" in the body of a message to majordomo@xxxxxxxxxxxxxxx More majordomo info at http://vger.kernel.org/majordomo-info.html