I encountered an issue while trying to use git subtree with the FreeBSD svn->git mirror: I found that when "git subtree split" encounters a commit with an empty "git ls-tree" for the subdirectory being split, it ends up recording the original parent as the new parent in the split history that's being created. This then leads to unrelated history appearing in the split subtree. Below is a shell script that demonstrates the issue - this is not the precise case that I encountered in the FreeBSD repo, but the behaviour is identical (and it doesn't take nearly 10 minutes to run). Running the script and then "git log" of the commit printed by the final (git subtree) command includes the unrelated history in dir2/. It looks like this comes from the cache_set "$rev" "$rev" in process_split_commit() added in 39f5fff0d53. This is under the suspicious-looking "ugly. is there no better way to tell if this is a subtree vs. a mainline commit? Does it matter" comment. However, I don't yet understand enough of git-subtree's operation to propose a fix. --repro.sh-- #!/bin/sh rm -rf subrepo-issue mkdir -p subrepo-issue cd subrepo-issue git init . mkdir -p dir1 dir2 touch dir1/file1 dir2/file2 git add dir1 dir2 git commit -m 'initial commit' echo 'file2' > dir2/file2 git commit -m 'file2 modified' dir2/file2 git rm dir1/file1 git commit -m 'remove file1' mkdir -p dir1 touch dir1/file1 git add dir1 git commit -m 'restore file1' echo 'file1' > dir1/file1 git commit -m 'file1 modified' dir1/file1 git subtree split --prefix=dir1/
