Git clean removing tracked files semi-regularly

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Hello, I work on a project that uses git. "git clean -xdf" is a common command to run to clean up the environment, however sometimes this command deletes the entire contents of two of the folders and all the files it deletes are being tracked which according to the documentation should not be deleted.

The project is located at https://github.com/aspnet/SignalR and the two folders it likes to delete are https://github.com/aspnet/SignalR/tree/release/2.2/clients/ts/signalr-protocol-msgpack and https://github.com/aspnet/SignalR/tree/release/2.2/clients/ts/signalr 

If you need me to collect git logs etc. please don't hesitate to ask!





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