Hi, When switching clean branches I see untracked files appearing where I expect to see "nothing to commit, working tree clean". This happens when submodules get removed on one branch but its present in another. I expect git to either not mark the submodule in git status as untracked or git to remove the submodule as it would for ordinary tracked files which do not exist on a branch anymore. Tested on Windows with: git version 2.15.1.windows.2 Tested on Ubuntu Linux with same output: git version 2.14.1 Test: git init test git init submodule cd submodule touch file.txt git add file.txt git commit -m "test" cd ../test touch initial.txt git add initial.txt git commit -m "initial" git checkout -b develop git status #On branch develop #nothing to commit, working tree clean git submodule add ../submodule sub git add sub git commit -m "submodule added" git status #On branch develop #nothing to commit, working tree clean git checkout master git status #On branch master #Untracked files: # (use "git add <file>..." to include in what will be committed) # # sub/ # #nothing added to commit but untracked files present (use "git add" to track) # expected: nothing to commit, working tree clean git submodule update # (no output) git submodule # (no output) git status #On branch master #Untracked files: # (use "git add <file>..." to include in what will be committed) # # sub/ # #nothing added to commit but untracked files present (use "git add" to track) # expected: nothing to commit, working tree clean git clean -dfx #Skipping repository sub/ Best Regards, Mike Friedrich ________________________________ This email is non-binding, is subject to contract, and neither Kulicke and Soffa Industries, Inc. nor its subsidiaries (each and collectively “K&S”) shall have any obligation to you to consummate the transactions herein or to enter into any agreement, other than in accordance with the terms and conditions of a definitive agreement if and when negotiated, finalized and executed between the parties. This email and all its contents are protected by International and United States copyright laws. Any reproduction or use of all or any part of this email without the express written consent of K&S is prohibited.