On Thu, Jan 11, 2018 at 6:12 AM, Ævar Arnfjörð Bjarmason <avarab@xxxxxxxxx> wrote: > What if we wanted to drop sha1collisiondetection/ as a submodule and > replace it with a copy of what's now in sha1dc/? I ran into this with > another project, but here's a way to reproduce it on git.git: > > ( > rm -rf /tmp/git && > git clone git@xxxxxxxxxx:git/git.git /tmp/git > cd /tmp/git && > git tag nuke-before && > git submodule update --init && At this point $ tail -n 3 .git/config [submodule "sha1collisiondetection"] active = true url = https://github.com/cr-marcstevens/sha1collisiondetection.git > git rm -r .gitmodules sha1collisiondetection && no need to delete the .gitmodules here. Git detects you're deleting a submodule and adjusts the .gitmodules file (it is empty after just "git rm sha1coll...") > git commit -m"Nuke sha1dc submodule" && > cp -Rvp sha1dc sha1collisiondetection && > git add sha1collisiondetection && > git commit -m"Now it's not a submodule" && > git tag nuke-after && > git reset --hard nuke-before && As bmwill said, you may want to reset with --recurse-submodules here, "git ls-tree HEAD |grep sha1c" will show commit and "git status" thinks everything is fine on disk. I have no suspicion to believe otherwise. But we digress, you chose to not use that flag. > git submodule update --init && # skip this and the below won't fail > git reset --hard nuke-after && # Emulate someone doing a pull $ git reset --hard nuke-after warning: unable to rmdir 'sha1collisiondetection': Directory not empty HEAD is now at f683a1b81 Now it's not a submodule $ git reset --hard nuke-after --recurse-submodules HEAD is now at f683a1b81 Now it's not a submodule > git ls-tree HEAD | grep sha1collisiondetection && # OK, shows "tree" not "commit" > test $(git rev-parse HEAD) == $(git -C sha1collisiondetection/ log -1 --pretty=format:%H) && echo OK || echo WTF > ) > > This results in a really bizarre state where according to ls-tree > sha1collisiondetection is a tree at the current commit: > > 040000 tree 81583289d96bdde4b366c243ab524ea28d895ea5 sha1collisiondetection > > But git still believes there's a submodule there for some reason, and > shows the log for the upstream sha1collisiondetection project: > > git -C sha1collisiondetection/ log -1 (A) That is because the reset without flag do touch submodules kept the submodule in place and the -C in this command tells git to cd into that directory, (which is the submodule, an 'independent' repo) and shows the log of said repo. > commit 19d97bf (HEAD, origin/master, origin/HEAD, master) > Merge: 3f14d1b c93f0b4 > Author: Dan Shumow <shumow@xxxxxxxxx> > Date: Sat Jul 1 12:36:15 2017 -0700 > > Merge pull request #37 from avar/fixup-pull-request-34 > > Fix endian detection logic for Sparc, little endian BSD etc. > > Doing: > > git submodule deinit sha1collisiondetection Doing this after you reset to nuke-after, there are no submodules from the superprojects point of view, hence no submodule is touched/modified. :/ (There just happens to be a stray repository at a place where we'd want to have a tree). > Does nothing to help, then I thought it might be: > > git config -f .git/config -l|grep ^submodule > submodule.sha1collisiondetection.active=true > submodule.sha1collisiondetection.url=https://github.com/cr-marcstevens/sha1collisiondetection.git > > But running: > > git config --remove-section submodule.sha1collisiondetection This made the submodule not active any more, (note that at the current tree there is no submodule to begin with... so what effect to we want here?) > Doesn't help either, neither does removing the index: > > rm .git/index && > git reset --hard > > If you then do: > > rm -rf .git/modules Getting out the big hammer, eh? instead of deleting the submodules git repo, remove its worktree: rm -rf sha1collisiondetection (This is best done at time (A) above) > > You'll get this error: > > git -C sha1collisiondetection/ log -1 > fatal: Not a git repository: /tmp/git/sha1collisiondetection/../.git/modules/sha1collisiondetection > > But I can't see what's still referencing it. $ls -la /tmp/git/sha1collisiondetection ... -rw-r--r-- 1 sbeller eng 47 Jan 11 10:02 .git ... $ cat sha1collisiondetection/.git gitdir: ../.git/modules/sha1collisiondetection This is a crucial file, telling you there is a repo with the worktree at the place where .git lives and the git dir is at the location indicated (which you removed) > This problem is avoided if, as noted with a comment I skip: > > git submodule update --init > > But I shouldn't need to remember to de-init a submodule before moving to > a new commit that doesn't have it, least I end up in some seemingly > unrecoverable state. > > Am I missing something obvious here? The "git submodule update/init/deinit" is a "raw" command, (not to be confused with plumbing, I just made up "raw commands" ;) that is very good to deal with submodules, but that tool has sharp edges. Try this: $ git clone --recurse-submodules=. git@xxxxxxxxxx:git/git.git testgit $ cd testgit/ $ git config --list |grep submod submodule.active=. submodule.sha1collisiondetection.url=https://github.com/cr-marcstevens/sha1collisiondetection.git $ git config submodule.recurse true $ git tag before-nuke $ git rm sha1collisiondetection/ rm 'sha1collisiondetection' $ git commit -a -m delete_sub $ git tag after-nuke $ git checkout before-nuke $ git status # and more checks $ git checkout after-nuke $ git status # and more checks