[BUG] can't switch branches with submodules

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Hi,

I have two branches: master and gh-pages.  master has one submodule
called foo that gh-pages doesn't.  When I try to check out gh-pages
from master:

    warning: unable to rmdir foo: Directory not empty

And the foo directory exists in my worktree.  This is very annoying,
and I want to fix it now.  Where is this error coming from?  How does
the worktree get updated when I checkout?
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