Re: Getting "error: db5-error(5) from dbenv->open - In/Out-error"

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On Wed, 2017-06-14 at 19:46 +0200, Jon Ingason wrote:
> I just installed Fedora 26 Beta 1.4 Gnome Workstation from
> Fedora-Server-netinst-x86_64-26_Beta-1.4.iso. Then I did "sudo dnf
> update" in terminal window:
> 
> $ sudo dnf update --refresh
> Fedora 26 - x86_64 - Test Updates               5.4 MB/s |  23 MB
> 00:04
> Senaste kontroll av utgång av metadata: för 0:00:00 sedan den ons 14 jun
> 2017 19
> :16:47.
> Beroenden upplösta.
> ================================================================================
>  Paket            Arkitektur  Version                Förråd
>  Storlk
> ================================================================================
> Uppgraderar:
>  libdb            x86_64      5.3.28-22.fc26         updates-testing
>  749 k
>  libdb-utils      x86_64      5.3.28-22.fc26         updates-testing
>  137 k
> 
> Transaktionssammanfattning
> ================================================================================
> Uppgradera  2 Paket
> 
> Total storlek att hämta: 887 k
> Är detta ok [j/N]: j
> Hämtar paket:
> (1/2): libdb-utils-5.3.28-22.fc26.x86_64.rpm    1.7 MB/s | 137 kB
> 00:00
> (2/2): libdb-5.3.28-22.fc26.x86_64.rpm          4.0 MB/s | 749 kB
> 00:00
> --------------------------------------------------------------------------------
> Totalt                                          691 kB/s | 887 kB     00:01
> varning:
> /var/cache/dnf/updates-testing-b081e891bd0bf8fd/packages/libdb-5.3.28-2
> 2.fc26.x86_64.rpm: Huvud V3 RSA/SHA256 Signature, nyckel-ID 64dab85d: NOKEY
> Importing GPG key 0x64DAB85D:
>  Userid     : "Fedora 26 Primary (26) <fedora-26-primary@xxxxxxxxxxxxxxxxx>"
>  Fingerprint: E641 850B 77DF 4353 78D1 D7E2 812A 6B4B 64DA B85D
>  From       : /etc/pki/rpm-gpg/RPM-GPG-KEY-fedora-26-x86_64
> Är detta ok [j/N]: j
> Nyckelimport lyckades
> Kör transaktionskontroll
> Transaktionskontrollen lyckades.
> Kör transaktionstest
> Transaktionstesten lyckades.
> Kör transaktionen
>   Förbereder   :
>    1/1
>   Uppgraderar  : libdb-5.3.28-22.fc26.x86_64
>    1/4
>   Kör skript   : libdb-5.3.28-22.fc26.x86_64
>    1/4
>   Uppgraderar  : libdb-utils-5.3.28-22.fc26.x86_64
>    2/4
>   Rensar upp   : libdb-utils-5.3.28-21.fc26.x86_64
>    3/4
>   Rensar upp   : libdb-5.3.28-21.fc26.x86_64
>    4/4
>   Kör skript   : libdb-5.3.28-21.fc26.x86_64
>    4/4
>   Verifierar   : libdb-5.3.28-22.fc26.x86_64
>    1/4
>   Verifierar   : libdb-utils-5.3.28-22.fc26.x86_64
>    2/4
>   Verifierar   : libdb-5.3.28-21.fc26.x86_64
>    3/4
>   Verifierar   : libdb-utils-5.3.28-21.fc26.x86_64
>    4/4
> 
> Uppgraderade:
>   libdb.x86_64 5.3.28-22.fc26         libdb-utils.x86_64 5.3.28-22.fc26
> 
> 
> Klart!
> $ sudo dnf install gnome-tweak-tool
> fel: db5-fel(5) från dbenv->open: In/ut-fel
> fel: kan inte öppna Packages-indexet med db5 - In/ut-fel (5)
> fel: kan inte öppna paketdatabas i /var/lib/rpm
> Fel: Error: rpmdb open failed
> $
> 
> I guess that there is something wrong with libdb-5.3.28-21.fc26.x86_64
> or libdb-utils.x86_64 5.3.28-22.fc26
> 
> Some suggestion what to do?

This is known. Don't worry about the error message, it's harmless. If
you get errors when trying to run dnf, yum, etc. in future, run 'rpm --
rebuilddb' and it should fix it.

See:

https://fedoraproject.org/wiki/Common_F26_bugs#libdb-rebuilddb

Sorry for the trouble.
-- 
Adam Williamson
Fedora QA Community Monkey
IRC: adamw | Twitter: AdamW_Fedora | XMPP: adamw AT happyassassin . net
http://www.happyassassin.net
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