[Bug 2283110] Review Request: python-vascpy - Vasculature API

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

 



https://bugzilla.redhat.com/show_bug.cgi?id=2283110

Ben Beasley <code@xxxxxxxxxxxxxxxxxx> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
                 CC|                            |code@xxxxxxxxxxxxxxxxxx



--- Comment #2 from Ben Beasley <code@xxxxxxxxxxxxxxxxxx> ---
It doesn’t look like this builds in Rawhide anymore:

tests/test_point_vasculature.py::test_file_formats Fatal Python error:
Segmentation fault
Current thread 0x00007f42e6a65740 (most recent call first):
  File "<frozen importlib._bootstrap>", line 488 in _call_with_frames_removed
  File "<frozen importlib._bootstrap_external>", line 1316 in create_module
  File "<frozen importlib._bootstrap>", line 813 in module_from_spec
  File "<frozen importlib._bootstrap>", line 921 in _load_unlocked
  File "<frozen importlib._bootstrap>", line 1331 in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 1360 in _find_and_load
  File "/usr/lib64/python3.13/site-packages/vtk.py", line 4 in <module>
  File "<frozen importlib._bootstrap>", line 488 in _call_with_frames_removed
  File "<frozen importlib._bootstrap_external>", line 1022 in exec_module
  File "<frozen importlib._bootstrap>", line 935 in _load_unlocked
  File "<frozen importlib._bootstrap>", line 1331 in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 1360 in _find_and_load
  File
"/builddir/build/BUILD/python-vascpy-0.1.1-build/BUILDROOT/usr/lib/python3.13/site-packages/vascpy/point_graph/io.py",
line 237 in write
  File
"/builddir/build/BUILD/python-vascpy-0.1.1-build/BUILDROOT/usr/lib/python3.13/site-packages/vascpy/point_vasculature.py",
line 119 in save_vtk
  File
"/builddir/build/BUILD/python-vascpy-0.1.1-build/BUILDROOT/usr/lib/python3.13/site-packages/vascpy/point_vasculature.py",
line 241 in save
  File
"/builddir/build/BUILD/python-vascpy-0.1.1-build/vascpy-0.1.1/tests/test_point_vasculature.py",
line 523 in test_file_formats
  File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 194 in
pytest_pyfunc_call
  File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 77 in
_multicall
  File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 115 in
_hookexec
  File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 493 in
__call__
  File "/usr/lib/python3.13/site-packages/_pytest/python.py", line 1792 in
runtest
  File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 169 in
pytest_runtest_call
  File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 77 in
_multicall
  File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 115 in
_hookexec
  File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 493 in
__call__
  File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 262 in
<lambda>
  File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 341 in
from_call
  File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 261 in
call_runtest_hook
  File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 222 in
call_and_report
  File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 133 in
runtestprotocol
  File "/usr/lib/python3.13/site-packages/_pytest/runner.py", line 114 in
pytest_runtest_protocol
  File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 77 in
_multicall
  File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 115 in
_hookexec
  File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 493 in
__call__
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 350 in
pytest_runtestloop
  File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 77 in
_multicall
  File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 115 in
_hookexec
  File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 493 in
__call__
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 325 in _main
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 271 in
wrap_session
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 318 in
pytest_cmdline_main
  File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 77 in
_multicall
  File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 115 in
_hookexec
  File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 493 in
__call__
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 350 in
pytest_runtestloop
  File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 77 in
_multicall
  File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 115 in
_hookexec
  File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 493 in
__call__
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 325 in _main
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 271 in
wrap_session
  File "/usr/lib/python3.13/site-packages/_pytest/main.py", line 318 in
pytest_cmdline_main
  File "/usr/lib/python3.13/site-packages/pluggy/_callers.py", line 77 in
_multicall
  File "/usr/lib/python3.13/site-packages/pluggy/_manager.py", line 115 in
_hookexec
  File "/usr/lib/python3.13/site-packages/pluggy/_hooks.py", line 493 in
__call__
  File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 169
in main
  File "/usr/lib/python3.13/site-packages/_pytest/config/__init__.py", line 192
in console_main
  File "/usr/bin/pytest", line 8 in <module>
Extension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests,
numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal,
numpy.random._common, numpy.random.bit_generator,
numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand,
numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64,
numpy.random._generator, pandas._libs.tslibs.ccalendar,
pandas._libs.tslibs.np_datetime, pandas._libs.tslibs.dtypes,
pandas._libs.tslibs.base, pandas._libs.tslibs.nattype,
pandas._libs.tslibs.timezones, pandas._libs.tslibs.fields,
pandas._libs.tslibs.timedeltas, pandas._libs.tslibs.tzconversion,
pandas._libs.tslibs.timestamps, pandas._libs.properties,
pandas._libs.tslibs.offsets, pandas._libs.tslibs.strptime,
pandas._libs.tslibs.parsing, pandas._libs.tslibs.conversion,
pandas._libs.tslibs.period, pandas._libs.tslibs.vectorized,
pandas._libs.ops_dispatch, pandas._libs.missing, pandas._libs.hashtable,
pandas._libs.algos, pandas._libs.interval, pandas._libs.lib, pandas._libs.ops,
numexpr.interpreter, bottleneck.move, bottleneck.nonreduce,
bottleneck.nonreduce_axis, bottleneck.reduce, pandas._libs.hashing,
pandas._libs.arrays, pandas._libs.tslib, pandas._libs.sparse,
pandas._libs.internals, pandas._libs.indexing, pandas._libs.index,
pandas._libs.writers, pandas._libs.join, pandas._libs.window.aggregations,
pandas._libs.window.indexers, pandas._libs.reshape, pandas._libs.groupby,
pandas._libs.json, pandas._libs.parsers, pandas._libs.testing, h5py._errors,
h5py.defs, h5py._objects, h5py.h5, h5py.utils, h5py.h5t, h5py.h5s, h5py.h5ac,
h5py.h5p, h5py.h5r, h5py._proxy, h5py._conv, h5py.h5z, h5py.h5a, h5py.h5d,
h5py.h5ds, h5py.h5g, h5py.h5i, h5py.h5f, h5py.h5fd, h5py.h5pl, h5py.h5o,
h5py.h5l, h5py._selector, scipy._lib._ccallback_c, scipy.sparse._sparsetools,
_csparsetools, scipy.sparse._csparsetools,
scipy.sparse.linalg._isolve._iterative, scipy.linalg._fblas,
scipy.linalg._flapack, scipy.linalg.cython_lapack,
scipy.linalg._cythonized_array_utils, scipy.linalg._solve_toeplitz,
scipy.linalg._decomp_lu_cython, scipy.linalg._matfuncs_sqrtm_triu,
scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm,
scipy.linalg._decomp_update, scipy.linalg._flinalg,
scipy.sparse.linalg._dsolve._superlu,
scipy.sparse.linalg._eigen.arpack._arpack, scipy.sparse.csgraph._tools,
scipy.sparse.csgraph._shortest_path, scipy.sparse.csgraph._traversal,
scipy.sparse.csgraph._min_spanning_tree, scipy.sparse.csgraph._flow,
scipy.sparse.csgraph._matching, scipy.sparse.csgraph._reordering (total: 107)
/var/tmp/rpm-tmp.NQZpV0: line 53:   423 Segmentation fault      (core dumped)
CFLAGS="${CFLAGS:-${RPM_OPT_FLAGS}}" LDFLAGS="${LDFLAGS:-${RPM_LD_FLAGS}}"
PATH="/builddir/build/BUILD/python-vascpy-0.1.1-build/BUILDROOT/usr/bin:$PATH"
PYTHONPATH="${PYTHONPATH:-/builddir/build/BUILD/python-vascpy-0.1.1-build/BUILDROOT/usr/lib64/python3.13/site-packages:/builddir/build/BUILD/python-vascpy-0.1.1-build/BUILDROOT/usr/lib/python3.13/site-packages}"
PYTHONDONTWRITEBYTECODE=1 PYTEST_ADDOPTS="${PYTEST_ADDOPTS:-}
--ignore=/builddir/build/BUILD/python-vascpy-0.1.1-build/vascpy-0.1.1/.pyproject-builddir"
PYTEST_XDIST_AUTO_NUM_WORKERS="${PYTEST_XDIST_AUTO_NUM_WORKERS:-16}"
/usr/bin/pytest -v


-- 
You are receiving this mail because:
You are always notified about changes to this product and component
You are on the CC list for the bug.
https://bugzilla.redhat.com/show_bug.cgi?id=2283110

Report this comment as SPAM: https://bugzilla.redhat.com/enter_bug.cgi?product=Bugzilla&format=report-spam&short_desc=Report%20of%20Bug%202283110%23c2

-- 
_______________________________________________
package-review mailing list -- package-review@xxxxxxxxxxxxxxxxxxxxxxx
To unsubscribe send an email to package-review-leave@xxxxxxxxxxxxxxxxxxxxxxx
Fedora Code of Conduct: https://docs.fedoraproject.org/en-US/project/code-of-conduct/
List Guidelines: https://fedoraproject.org/wiki/Mailing_list_guidelines
List Archives: https://lists.fedoraproject.org/archives/list/package-review@xxxxxxxxxxxxxxxxxxxxxxx
Do not reply to spam, report it: https://pagure.io/fedora-infrastructure/new_issue




[Index of Archives]     [Fedora Users]     [Fedora Desktop]     [Fedora SELinux]     [Yosemite Conditions]     [KDE Users]

  Powered by Linux