[Bug 2238263] Review Request: dbcsr - Distributed Block Compressed Sparse Row matrix library

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https://bugzilla.redhat.com/show_bug.cgi?id=2238263



--- Comment #24 from Benson Muite <benson_muite@xxxxxxxxxxxxx> ---
Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed



===== MUST items =====

C/C++:
[ ]: Provides: bundled(gnulib) in place as required.
     Note: Sources not installed
[x]: Package does not contain kernel modules.
[x]: If your application is a C or C++ application you must list a
     BuildRequires against gcc, gcc-c++ or clang.
[x]: Header files in -devel subpackage, if present.
[x]: ldconfig not called in %post and %postun for Fedora 28 and later.
[x]: Package does not contain any libtool archives (.la)
[x]: Package contains no static executables.
[x]: Rpath absent or only used for internal libs.
[x]: Development (unversioned) .so files in -devel subpackage, if present.

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses
     found: "Unknown or generated", "*No copyright* GNU General Public
     License", "GNU General Public License, Version 2", "Boost Software
     License 1.0". 144 files have unknown license. Detailed output of
     licensecheck in /home/fedora/2238263-dbcsr/licensecheck.txt
[x]: License file installed when any subpackage combination is installed.
[ ]: Package requires other packages for directories it uses.
     Note: No known owner of /usr/lib64/gfortran
[ ]: Package must own all directories that it creates.
     Note: Directories without known owners: /usr/lib64/openmpi/lib/cmake,
     /usr/lib64/gfortran/modules/openmpi, /usr/lib64/mpich/lib/cmake,
     /usr/lib64/gfortran, /usr/lib64/mpich/include,
     /usr/lib64/gfortran/modules, /usr/lib64/openmpi/include,
     /usr/lib64/gfortran/modules/mpich
[x]: %build honors applicable compiler flags or justifies otherwise.
[ ]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[x]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Useful -debuginfo package or justification otherwise.
[ ]: Package is not known to require an ExcludeArch tag.
[ ]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Test run failed
[ ]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: There are rpmlint messages (see attachment).
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: The License field must be a valid SPDX expression.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package must not depend on deprecated() packages.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

===== SHOULD items =====

Generic:
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[x]: Fully versioned dependency in subpackages if applicable.
     Note: No Requires: %{name}%{?_isa} = %{version}-%{release} in dbcsr-
     openmpi , dbcsr-openmpi-devel , dbcsr-mpich , dbcsr-mpich-devel
[ ]: Package functions as described.
[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[x]: Patches link to upstream bugs/comments/lists or are otherwise
     justified.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
     Note: gpgverify is not used.
[ ]: Package should compile and build into binary rpms on all supported
     architectures.
[ ]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on debuginfo package(s).
     Note: No rpmlint messages.
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Large data in /usr/share should live in a noarch subpackage if package
     is arched.
[x]: Spec file according to URL is the same as in SRPM.

Rpmlint
-------
Checking: dbcsr-2.6.0-1.fc40.aarch64.rpm
          dbcsr-devel-2.6.0-1.fc40.aarch64.rpm
          dbcsr-openmpi-2.6.0-1.fc40.aarch64.rpm
          dbcsr-openmpi-devel-2.6.0-1.fc40.aarch64.rpm
          dbcsr-mpich-2.6.0-1.fc40.aarch64.rpm
          dbcsr-mpich-devel-2.6.0-1.fc40.aarch64.rpm
          dbcsr-debuginfo-2.6.0-1.fc40.aarch64.rpm
          dbcsr-debugsource-2.6.0-1.fc40.aarch64.rpm
          dbcsr-2.6.0-1.fc40.src.rpm
============================ rpmlint session starts
============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.12/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
rpmlintrc: [PosixPath('/tmp/tmp941baknm')]
checks: 31, packages: 9

dbcsr.src: W: strange-permission dbcsr-2.6.0.tar.gz 660
dbcsr.src: W: strange-permission dbcsr-flags.patch 660
dbcsr.src: W: strange-permission dbcsr-fmoddir.patch 660
dbcsr.src: W: strange-permission dbcsr.spec 660
dbcsr-mpich-devel.aarch64: W: only-non-binary-in-usr-lib
dbcsr-openmpi-devel.aarch64: W: only-non-binary-in-usr-lib
dbcsr-devel.aarch64: W: no-documentation
dbcsr-mpich-devel.aarch64: W: no-documentation
dbcsr-openmpi-devel.aarch64: W: no-documentation
dbcsr-debugsource.aarch64: E: files-duplicated-waste 7492578
 9 packages and 0 specfiles checked; 1 errors, 9 warnings, 1 badness; has taken
1.7 s 




Rpmlint (debuginfo)
-------------------
Checking: dbcsr-openmpi-debuginfo-2.6.0-1.fc40.aarch64.rpm
          dbcsr-mpich-debuginfo-2.6.0-1.fc40.aarch64.rpm
          dbcsr-debuginfo-2.6.0-1.fc40.aarch64.rpm
============================ rpmlint session starts
============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.12/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
rpmlintrc: [PosixPath('/tmp/tmpbl9_knez')]
checks: 31, packages: 3

 3 packages and 0 specfiles checked; 0 errors, 0 warnings, 0 badness; has taken
0.9 s 





Rpmlint (installed packages)
----------------------------
============================ rpmlint session starts
============================
rpmlint: 2.4.0
configuration:
    /usr/lib/python3.12/site-packages/rpmlint/configdefaults.toml
    /etc/xdg/rpmlint/fedora-legacy-licenses.toml
    /etc/xdg/rpmlint/fedora-spdx-licenses.toml
    /etc/xdg/rpmlint/fedora.toml
    /etc/xdg/rpmlint/scoring.toml
    /etc/xdg/rpmlint/users-groups.toml
    /etc/xdg/rpmlint/warn-on-functions.toml
checks: 31, packages: 10

dbcsr-mpich.aarch64: E: undefined-non-weak-symbol
/usr/lib64/mpich/lib/libdbcsr.so.2.6.0 MPI_UNWEIGHTED (/usr/lib64/mpich/l
ib/libmpifort.so.12)
....
dbcsr-mpich.aarch64: E: undefined-non-weak-symbol
/usr/lib64/mpich/lib/libdbcsr_c.so.2.6.0 PMPI_Status_set_elements     (/u
sr/lib64/mpich/lib/libmpifort.so.12)
dbcsr-mpich-devel.aarch64: W: only-non-binary-in-usr-lib
dbcsr-openmpi-devel.aarch64: W: only-non-binary-in-usr-lib
dbcsr-devel.aarch64: W: no-documentation
dbcsr-mpich-devel.aarch64: W: no-documentation
dbcsr-openmpi-devel.aarch64: W: no-documentation
dbcsr-debugsource.aarch64: E: files-duplicated-waste 7492578
 10 packages and 0 specfiles checked; 1705 errors, 5 warnings, 1705 badness;
has taken 3.0 s 



Source checksums
----------------
https://github.com/cp2k/dbcsr/releases/download/v2.6.0/dbcsr-2.6.0.tar.gz :
  CHECKSUM(SHA256) this package     :
c67b02ff9abc7c1f529af446a9f01f3ef9e5b0574f220259128da8d5ca7e9dc6
  CHECKSUM(SHA256) upstream package :
c67b02ff9abc7c1f529af446a9f01f3ef9e5b0574f220259128da8d5ca7e9dc6


Requires
--------
dbcsr (rpmlib, GLIBC filtered):
    ld-linux-aarch64.so.1()(64bit)
    libc.so.6()(64bit)
    libflexiblas.so.3()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_3.3.1)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libgfortran.so.5()(64bit)
    libgfortran.so.5(GFORTRAN_10)(64bit)
    libgfortran.so.5(GFORTRAN_8)(64bit)
    libgomp.so.1()(64bit)
    libgomp.so.1(GOMP_1.0)(64bit)
    libgomp.so.1(GOMP_4.0)(64bit)
    libgomp.so.1(GOMP_4.5)(64bit)
    libgomp.so.1(OMP_1.0)(64bit)
    libgomp.so.1(OMP_2.0)(64bit)
    libgomp.so.1(OMP_3.0)(64bit)
    libm.so.6()(64bit)
    rtld(GNU_HASH)

dbcsr-devel (rpmlib, GLIBC filtered):
    cmake-filesystem(aarch-64)
    dbcsr(aarch-64)

dbcsr-openmpi (rpmlib, GLIBC filtered):
    ld-linux-aarch64.so.1()(64bit)
    libc.so.6()(64bit)
    libdbcsr.so.2.6()(64bit)(openmpi-aarch64)
    libflexiblas.so.3()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_3.3.1)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libgfortran.so.5()(64bit)
    libgfortran.so.5(GFORTRAN_10)(64bit)
    libgfortran.so.5(GFORTRAN_8)(64bit)
    libgomp.so.1()(64bit)
    libgomp.so.1(GOMP_1.0)(64bit)
    libgomp.so.1(GOMP_4.0)(64bit)
    libgomp.so.1(GOMP_4.5)(64bit)
    libgomp.so.1(OMP_1.0)(64bit)
    libgomp.so.1(OMP_2.0)(64bit)
    libgomp.so.1(OMP_3.0)(64bit)
    libm.so.6()(64bit)
    libmpi_mpifh.so.40()(64bit)(openmpi-aarch64)
    rtld(GNU_HASH)

dbcsr-openmpi-devel (rpmlib, GLIBC filtered):
    dbcsr-openmpi(aarch-64)

dbcsr-mpich (rpmlib, GLIBC filtered):
    ld-linux-aarch64.so.1()(64bit)
    libc.so.6()(64bit)
    libdbcsr.so.2.6()(64bit)(mpich-aarch64)
    libflexiblas.so.3()(64bit)
    libgcc_s.so.1()(64bit)
    libgcc_s.so.1(GCC_3.0)(64bit)
    libgcc_s.so.1(GCC_3.3.1)(64bit)
    libgcc_s.so.1(GCC_4.0.0)(64bit)
    libgfortran.so.5()(64bit)
    libgfortran.so.5(GFORTRAN_10)(64bit)
    libgfortran.so.5(GFORTRAN_8)(64bit)
    libgomp.so.1()(64bit)
    libgomp.so.1(GOMP_1.0)(64bit)
    libgomp.so.1(GOMP_4.0)(64bit)
    libgomp.so.1(GOMP_4.5)(64bit)
    libgomp.so.1(OMP_1.0)(64bit)
    libgomp.so.1(OMP_2.0)(64bit)
    libgomp.so.1(OMP_3.0)(64bit)
    libm.so.6()(64bit)
    libmpifort.so.12()(64bit)(mpich-aarch64)
    rtld(GNU_HASH)

dbcsr-mpich-devel (rpmlib, GLIBC filtered):
    dbcsr-mpich(aarch-64)

dbcsr-debuginfo (rpmlib, GLIBC filtered):

dbcsr-debugsource (rpmlib, GLIBC filtered):



Provides
--------
dbcsr:
    dbcsr
    dbcsr(aarch-64)
    libdbcsr.so.2.6()(64bit)

dbcsr-devel:
    cmake(DBCSR)
    cmake(dbcsr)
    dbcsr-devel
    dbcsr-devel(aarch-64)

dbcsr-openmpi:
    dbcsr-openmpi
    dbcsr-openmpi(aarch-64)
    libdbcsr.so.2.6()(64bit)(openmpi-aarch64)
    libdbcsr_c.so.2.6()(64bit)(openmpi-aarch64)

dbcsr-openmpi-devel:
    dbcsr-openmpi-devel
    dbcsr-openmpi-devel(aarch-64)

dbcsr-mpich:
    dbcsr-mpich
    dbcsr-mpich(aarch-64)
    libdbcsr.so.2.6()(64bit)(mpich-aarch64)
    libdbcsr_c.so.2.6()(64bit)(mpich-aarch64)

dbcsr-mpich-devel:
    dbcsr-mpich-devel
    dbcsr-mpich-devel(aarch-64)

dbcsr-debuginfo:
    dbcsr-debuginfo
    dbcsr-debuginfo(aarch-64)
    debuginfo(build-id)

dbcsr-debugsource:
    dbcsr-debugsource
    dbcsr-debugsource(aarch-64)


Generated by fedora-review 0.10.0 (e79b66b) last change: 2023-07-24
Command line :/usr/bin/fedora-review -b 2238263
Buildroot used: fedora-rawhide-aarch64
Active plugins: C/C++, Shell-api, Generic
Disabled plugins: Haskell, Ocaml, Java, Python, SugarActivity, Perl, R, fonts,
PHP
Disabled flags: EXARCH, EPEL6, EPEL7, DISTTAG, BATCH

Comments:
a) Have made pull requests to the fedora repositories for OpenMPI and MPICH
packages
to own some of the directories listed above without owners.  Probably further
pull
requests are needed for the gfortran subdirectories.
b) Documentation requires Ford which am packaging:
https://github.com/Fortran-FOSS-Programmers/ford
c) s390x build fails:
https://koji.fedoraproject.org/koji/taskinfo?taskID=106962999


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https://bugzilla.redhat.com/show_bug.cgi?id=2238263

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