[Bug 2061077] Review Request: libsonata - A Python and C++ interface to the SONATA format

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https://bugzilla.redhat.com/show_bug.cgi?id=2061077

Jerry James <loganjerry@xxxxxxxxx> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
        Environment|                            |If this bug requires
                   |                            |documentation, please
                   |                            |select an appropriate Doc
                   |                            |Type value.



--- Comment #3 from Jerry James <loganjerry@xxxxxxxxx> ---
Incidentally, I thought I would take a quick peek at those test failures. 
Running the first failed test by hand generates some interesting output:

```
Filters: ElementReportReader
HDF5-DIAG: Error detected in HDF5 (1.12.1) thread 0:
  #000: ../../src/H5F.c line 620 in H5Fopen(): unable to open file
    major: File accessibility
    minor: Unable to open file
  #001: ../../src/H5VLcallback.c line 3501 in H5VL_file_open(): failed to
iterate over available VOL connector plugins
    major: Virtual Object Layer
    minor: Iteration failed
  #002: ../../src/H5PLpath.c line 578 in H5PL__path_table_iterate(): can't
iterate over plugins in plugin path '(null)'
    major: Plugin for dynamically loaded library
    minor: Iteration failed
  #003: ../../src/H5PLpath.c line 620 in
H5PL__path_table_iterate_process_path(): can't open directory:
/usr/local/hdf5/lib/plugin
    major: Plugin for dynamically loaded library
    minor: Can't open directory or file
  #004: ../../src/H5VLcallback.c line 3351 in H5VL__file_open(): open failed
    major: Virtual Object Layer
    minor: Can't open object
  #005: ../../src/H5VLnative_file.c line 97 in H5VL__native_file_open(): unable
to open file
    major: File accessibility
    minor: Unable to open file
  #006: ../../src/H5Fint.c line 1834 in H5F_open(): unable to open file: name =
'./data/elements.h5', tent_flags = 0
    major: File accessibility
    minor: Unable to open file
  #007: ../../src/H5FD.c line 723 in H5FD_open(): open failed
    major: Virtual File Layer
    minor: Unable to initialize object
  #008: ../../src/H5FDsec2.c line 352 in H5FD__sec2_open(): unable to open
file: name = './data/elements.h5', errno = 2, error message = 'No such file or
directory', flags = 0, o_flags = 0
    major: File accessibility
    minor: Unable to open file
```

I see the /usr/local path in %{_libdir}/libhdf5.so.200.1.0, so that should be
fixed as well:

$ strings /usr/lib64/libhdf5.so.200.1.0 | grep -F /usr/local
/usr/local/hdf5/lib/plugin


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https://bugzilla.redhat.com/show_bug.cgi?id=2061077
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