[Bug 1961309] Review Request: xcfun - A library of approximate exchange-correlation functionals

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https://bugzilla.redhat.com/show_bug.cgi?id=1961309

Robert-André Mauchin 🐧 <zebob.m@xxxxxxxxx> changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |ASSIGNED
                 CC|                            |zebob.m@xxxxxxxxx
           Assignee|nobody@xxxxxxxxxxxxxxxxx    |zebob.m@xxxxxxxxx
              Flags|                            |fedora-review?



--- Comment #1 from Robert-André Mauchin 🐧 <zebob.m@xxxxxxxxx> ---
  - %cmake already defines -B with the new %cmake macro out or tree builds. See
https://fedoraproject.org/wiki/Changes/CMake_to_do_out-of-source_builds and
https://docs.fedoraproject.org/en-US/packaging-guidelines/CMake/

 - Similarly %cmake_build and %cmake_install have been introduced:

%build
%cmake -DCMAKE_BUILD_TYPE=RelWithDebInfo -DLIB=%{_lib}
-DXCFUN_PYTHON_INTERFACE=ON -DPYMOD_INSTALL_LIBDIR=../../%{python3_sitearch}

%cmake_build

%install
%cmake_install

 - and %ctest is now a thing:

%check
%ctest


 - A test is failing:

+ cd x86_64-koji-linux-gnu
+ ctest .
Test project /builddir/build/BUILD/xcfun-2.1.1/x86_64-koji-linux-gnu
    Start 1: testall
1/2 Test #1: testall ..........................   Passed    0.00 sec
    Start 2: python-interface
2/2 Test #2: python-interface .................***Failed    0.02 sec
50% tests passed, 1 tests failed out of 2
Total Test time (real) =   0.03 sec
The following tests FAILED:
          2 - python-interface (Failed)
Errors while running CTest
Output from these tests are in:
/builddir/build/BUILD/xcfun-2.1.1/x86_64-koji-linux-gnu/Testing/Temporary/LastTest.log
Use "--rerun-failed --output-on-failure" to re-run the failed cases verbosely.


With the change to %ctest you can actually see the error:

+ /usr/bin/ctest --output-on-failure --force-new-ctest-process -j16
Test project /builddir/build/BUILD/xcfun-2.1.1/x86_64-redhat-linux-gnu
    Start 1: testall
    Start 2: python-interface
1/2 Test #1: testall ..........................   Passed    0.00 sec
2/2 Test #2: python-interface .................***Failed    0.04 sec
/usr/bin/python3: No module named pytest
50% tests passed, 1 tests failed out of 2
Total Test time (real) =   0.05 sec
The following tests FAILED:
          2 - python-interface (Failed)
Errors while running CTest

So you need to BR pytest

Then numpy:

E   ModuleNotFoundError: No module named 'numpy'


BuildRequires: python3-pytest
BuildRequires: python3-numpy



 - Either fix these permissions or do not ship tests/

python3-xcfun.x86_64: E: non-readable
/usr/lib64/python3.9/site-packages/xcfun/tests/__pycache__/test_xcfun.cpython-39.opt-1.pyc
640
python3-xcfun.x86_64: E: non-readable
/usr/lib64/python3.9/site-packages/xcfun/tests/__pycache__/test_xcfun.cpython-39.pyc
640
python3-xcfun.x86_64: E: non-readable
/usr/lib64/python3.9/site-packages/xcfun/tests/test_xcfun.py 640


 In any case the python bytecode for tests must not be shipped. It is usually
handled by our own %pytest macros (PYTHONDONTWRITEBYTECODE=1)




Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed



===== MUST items =====

C/C++:
[x]: Package does not contain kernel modules.
[x]: Package contains no static executables.
[x]: Development (unversioned) .so files in -devel subpackage, if present.
     Note: Unversioned so-files in private %_libdir subdirectory (see
     attachment). Verify they are not in ld path.
[x]: If your application is a C or C++ application you must list a
     BuildRequires against gcc, gcc-c++ or clang.
[x]: Header files in -devel subpackage, if present.
[x]: ldconfig not called in %post and %postun for Fedora 28 and later.
[x]: Package does not contain any libtool archives (.la)
[x]: Rpath absent or only used for internal libs.

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses
     found: "Unknown or generated", "[generated file]", "*No copyright*
     Mozilla Public License 2.0", "Mozilla Public License 2.0", "*No
     copyright* BSD 3-clause "New" or "Revised" License", "*No copyright*
     [generated file]", "Expat License", "*No copyright* GNU Lesser General
     Public License". 85 files have unknown license. Detailed output of
     licensecheck in /home/bob/packaging/review/xcfun/review-
     xcfun/licensecheck.txt
[x]: License file installed when any subpackage combination is installed.
[x]: %build honors applicable compiler flags or justifies otherwise.
[x]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[x]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[x]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[x]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Useful -debuginfo package or justification otherwise.
[x]: Package is not known to require an ExcludeArch tag.
[-]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 20480 bytes in 2 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: There are rpmlint messages (see attachment).
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: Package requires other packages for directories it uses.
[x]: Package does not own files or directories owned by other packages.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[x]: Python eggs must not download any dependencies during the build
     process.
[x]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Packages MUST NOT have dependencies (either build-time or runtime) on
     packages named with the unversioned python- prefix unless no properly
     versioned package exists. Dependencies on Python packages instead MUST
     use names beginning with python2- or python3- as appropriate.
[x]: Python packages must not contain %{pythonX_site(lib|arch)}/* in %files
[x]: Binary eggs must be removed in %prep

===== SHOULD items =====

Generic:
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[x]: Final provides and requires are sane (see attachments).
[x]: Fully versioned dependency in subpackages if applicable.
     Note: No Requires: %{name}%{?_isa} = %{version}-%{release} in xcfun-
     devel , python3-xcfun
[?]: Package functions as described.
[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Sources are verified with gpgverify first in %prep if upstream
     publishes signatures.
     Note: gpgverify is not used.
[-]: Description and summary sections in the package spec file contains
     translations for supported Non-English languages, if available.
[x]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on debuginfo package(s).
     Note: No rpmlint messages.
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Large data in /usr/share should live in a noarch subpackage if package
     is arched.
[x]: Spec file according to URL is the same as in SRPM.


Rpmlint
-------
Checking: xcfun-2.1.1-1.fc35.x86_64.rpm
          xcfun-devel-2.1.1-1.fc35.x86_64.rpm
          python3-xcfun-2.1.1-1.fc35.x86_64.rpm
          xcfun-debuginfo-2.1.1-1.fc35.x86_64.rpm
          xcfun-debugsource-2.1.1-1.fc35.x86_64.rpm
          xcfun-2.1.1-1.fc35.src.rpm
xcfun.x86_64: W: spelling-error Summary(en_US) functionals -> functional,
functional s, functionary
xcfun.x86_64: W: spelling-error %description -l en_US functionals ->
functional, functional s, functionary
xcfun.x86_64: W: shared-lib-calls-exit /usr/lib64/libxcfun.so.2
exit@GLIBC_2.2.5
xcfun-devel.x86_64: W: no-documentation
python3-xcfun.x86_64: W: spelling-error %description -l en_US functionals ->
functional, functional s, functionary
python3-xcfun.x86_64: W: no-documentation
python3-xcfun.x86_64: E: non-readable
/usr/lib64/python3.9/site-packages/xcfun/tests/__pycache__/test_xcfun.cpython-39.opt-1.pyc
640
python3-xcfun.x86_64: E: non-readable
/usr/lib64/python3.9/site-packages/xcfun/tests/__pycache__/test_xcfun.cpython-39.pyc
640
python3-xcfun.x86_64: E: non-readable
/usr/lib64/python3.9/site-packages/xcfun/tests/test_xcfun.py 640
xcfun.src: W: spelling-error Summary(en_US) functionals -> functional,
functional s, functionary
xcfun.src: W: spelling-error %description -l en_US functionals -> functional,
functional s, functionary
6 packages and 0 specfiles checked; 3 errors, 8 warnings.


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