[Bug 1224385] Review Request: percolator - Software for postprocessing of shotgun proteomics data

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https://bugzilla.redhat.com/show_bug.cgi?id=1224385



--- Comment #3 from David Tardon <dtardon@xxxxxxxxxx> ---
Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed

===== MUST items =====

Generic:
[ ]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses found:
     "Apache (v2.0)", "LGPL (v2.1 or later) (with incorrect FSF address)",
     "Unknown or generated". 84 files have unknown license.

I assume that the LGPLv2+ sources are not used?

[!]: If the package is under multiple licenses, the licensing breakdown must
     be documented in the spec.

===== EXTRA items =====

Generic:
[!]: Large data in /usr/share should live in a noarch subpackage if package is
     arched.
     Note: Arch-ed rpms have a total of 11499520 bytes in /usr/share
     percolator-2.09.0-1.fc20.x86_64.rpm:11499520
     See:
    
http://fedoraproject.org/wiki/Packaging:ReviewGuidelines#Package_Review_Guidelines

Rpmlint
-------
Checking: percolator-2.09.0-1.fc20.x86_64.rpm
          percolator-2.09.0-1.fc20.src.rpm
percolator.x86_64: W: spelling-error Summary(en_US) postprocessing -> post
processing, post-processing, teleprocessing
percolator.x86_64: W: spelling-error Summary(en_US) proteomics -> Proterozoic
percolator.x86_64: W: spelling-error %description -l en_US spectrometry ->
spectrometer, spectroscopy, spectroscope
percolator.x86_64: W: spelling-error %description -l en_US peptide -> pep tide,
pep-tide, peptic
percolator.x86_64: E: description-line-too-long C The first step in analyzing
an mass spectrometry assay is to match the harvested spectra
percolator.x86_64: E: description-line-too-long C against a target database
using database search engines such as Sequest and Mascot,
percolator.x86_64: E: description-line-too-long C and calculates accurate
statistics such as q-value (FDR) and posterior error probabilities.
percolator.x86_64: E: script-without-shebang
/usr/share/licenses/percolator/license.txt
percolator.x86_64: W: spurious-executable-perm
/usr/share/doc/percolator/ReadMe.txt
percolator.x86_64: W: no-manual-page-for-binary tandem2pin
percolator.x86_64: W: no-manual-page-for-binary msgf2pin
percolator.x86_64: W: no-manual-page-for-binary percolator
percolator.x86_64: W: no-manual-page-for-binary elude
percolator.x86_64: W: no-manual-page-for-binary qvality
percolator.x86_64: W: no-manual-page-for-binary sqt2pin
percolator.src: W: spelling-error Summary(en_US) postprocessing -> post
processing, post-processing, teleprocessing
percolator.src: W: spelling-error Summary(en_US) proteomics -> Proterozoic
percolator.src: W: spelling-error %description -l en_US spectrometry ->
spectrometer, spectroscopy, spectroscope
percolator.src: W: spelling-error %description -l en_US peptide -> pep tide,
pep-tide, peptic
percolator.src: E: description-line-too-long C The first step in analyzing an
mass spectrometry assay is to match the harvested spectra
percolator.src: E: description-line-too-long C against a target database using
database search engines such as Sequest and Mascot,
percolator.src: E: description-line-too-long C and calculates accurate
statistics such as q-value (FDR) and posterior error probabilities.
2 packages and 0 specfiles checked; 7 errors, 15 warnings.

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