[Bug 1167467] New: Review Request: bionetgen - Software for rule-based modeling of biochemical systems

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https://bugzilla.redhat.com/show_bug.cgi?id=1167467

            Bug ID: 1167467
           Summary: Review Request: bionetgen - Software for rule-based
                    modeling of biochemical systems
           Product: Fedora
           Version: rawhide
         Component: Package Review
          Severity: medium
          Priority: medium
          Assignee: nobody@xxxxxxxxxxxxxxxxx
          Reporter: zbyszek@xxxxxxxxx
        QA Contact: extras-qa@xxxxxxxxxxxxxxxxx
                CC: package-review@xxxxxxxxxxxxxxxxxxxxxxx



Spec URL: http://in.waw.pl/~zbyszek/fedora/bionetgen.spec
SRPM URL: http://in.waw.pl/~zbyszek/fedora/bionetgen-2.2.5-1.fc22.src.rpm
Description:
BioNetGen is software for the specification and simulation of
rule-based models of biochemical systems, including signal
transduction, metabolic, and genetic regulatory networks. The
BioNetGen language has recently been extended to include explicit
representation of compartments. A review of methods for rule-based
modeling is available in Science Signaling (Sci. STKE, 18 July 2006,
Issue 344, p. re6).

BioNetGen is presently a mixture of Perl and C++. Network generation
is currently implemented in Perl, the network simulator is C++, and a
new language parser is being developed with ANTLR.

Fedora Account System Username: zbyszek

Some notes: the package makes all perl modules top-level, so they are not
really suitable for use from outside. A huge
__provides_exclude/__requires_exclude is necessary to work around this. I'll
try to work with upstream to fix that.

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