Please do not reply directly to this email. All additional comments should be made in the comments box of this bug. Summary: Review Request: EMBOSS - The European Molecular Biology Open Software Suite https://bugzilla.redhat.com/show_bug.cgi?id=496133 Summary: Review Request: EMBOSS - The European Molecular Biology Open Software Suite Product: Fedora Version: rawhide Platform: All OS/Version: Linux Status: NEW Severity: medium Priority: medium Component: Package Review AssignedTo: nobody@xxxxxxxxxxxxxxxxx ReportedBy: belegdol@xxxxxxxxx QAContact: extras-qa@xxxxxxxxxxxxxxxxx CC: notting@xxxxxxxxxx, fedora-package-review@xxxxxxxxxx Estimated Hours: 0.0 Classification: Fedora Spec URL: http://belegdol.fedorapeople.org/EMBOSS.spec SRPM URL: http://belegdol.fedorapeople.org/EMBOSS-6.0.1-2.fc10.src.rpm Description: EMBOSS is a new, free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. Reference for EMBOSS: Rice,P. Longden,I. and Bleasby,A. "EMBOSS: The European Molecular Biology Open Software Suite" Trends in Genetics June 2000, vol 16, No 6. pp.276-277 This package is not yet finished, but I thought that bringing the polishing part into public cannot hurt. It builds fine on all primary architectures: https://koji.fedoraproject.org/koji/taskinfo?taskID=1302809 rpmlint is not silent yet, since I'm not sure how to handle the warnings regarding the executable permissions: EMBOSS.x86_64: W: conffile-without-noreplace-flag /etc/profile.d/emboss.sh EMBOSS.x86_64: W: conffile-without-noreplace-flag /etc/profile.d/emboss.csh EMBOSS-devel.x86_64: W: no-documentation EMBOSS-java.x86_64: W: spurious-executable-perm /usr/share/doc/EMBOSS-java-6.0.1/api/makeDocs.csh EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/utils/install-jemboss-server.sh 0644 EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/utils/makeJar.csh 0644 EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/api/getClasses.pl 0644 EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/utils/makeFileManagerJNLP.sh 0644 EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/api/makeDocs.csh 0644 EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/runJemboss.sh 0644 EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/utils/makeJNLP.sh 0644 EMBOSS-java.x86_64: W: spurious-executable-perm /usr/share/doc/EMBOSS-java-6.0.1/api/getClasses.pl EMBOSS-java.x86_64: E: non-executable-script /usr/share/EMBOSS/jemboss/utils/keys.sh 0644 EMBOSS-java.x86_64: W: doc-file-dependency /usr/share/doc/EMBOSS-java-6.0.1/api/getClasses.pl /usr/bin/perl EMBOSS-java.x86_64: W: class-path-in-manifest /usr/share/EMBOSS/jemboss/lib/axis/commons-logging.jar EMBOSS-libs.x86_64: W: shared-lib-calls-exit /usr/lib64/libeplplot.so.3.2.7 exit@xxxxxxxxxxx EMBOSS-libs.x86_64: W: no-documentation 5 packages and 0 specfiles checked; 8 errors, 9 warnings. -- Configure bugmail: https://bugzilla.redhat.com/userprefs.cgi?tab=email ------- You are receiving this mail because: ------- You are on the CC list for the bug. _______________________________________________ Fedora-package-review mailing list Fedora-package-review@xxxxxxxxxx http://www.redhat.com/mailman/listinfo/fedora-package-review