-------------------------------------------------------------------------------- Fedora Update Notification FEDORA-2025-ab645217a4 2025-02-16 01:19:56.138958+00:00 -------------------------------------------------------------------------------- Name : python-probeinterface Product : Fedora 41 Version : 0.2.25 Release : 2.fc41 URL : https://github.com/SpikeInterface/probeinterface Summary : Handles probe layout, geometry, and wiring to device Description : A Python package to handle the layout, geometry, and wiring of silicon probes for extracellular electrophysiology experiments. Goals Make a lightweight package to handle: â?¢ probe contact geometry (both 2D and 3D layouts) â?¢ probe shape (contour of the probe, shape of channel contact, â?¦) â?¢ probe wiring to device (the physical layout often doesnâ??t match the channel ordering) â?¢ combining several probes into a device with global geometry + global wiring â?¢ exporting probe geometry data into JSON files â?¢ loading existing probe geometry files (Neuronexus, imec, Cambridge Neurotechâ?¦) Started here Bonus: â?¢ optional plotting (based on matplotlib) â?¢ load/save geometry using common formats (PRB, CSV, NWB, â?¦) â?¢ handle SI length units correctly um/mm/â?¦ Target users/project: â?¢ spikeinterface team: integrate this into spikeextractor for channel location â?¢ neo team: handle array_annotations for AnalogSignal â?¢ spikeforest team: use this package for plotting probe activity â?¢ phy team: integrate for probe display â?¢ spyking-circus team: handle probe with this package â?¢ kilosort team: handle probe with this package â?¢ tridesclous team: handle probe with this package â?¢ open ephys team: automatically generate channel map configuration files -------------------------------------------------------------------------------- Update Information: probeinterface 0.2.25 (Feb, 6th 2025) Features Add cambridge neurotech adaptor to wiring > RHD2164 Refactor neuropixel in a separate file and generate the NP library Regenerate ASSY-1-P1 and ASSY-1-P2 probes Bug fixes Fix OpenEphys interface issue with multiple probes of which some are disabled Update schema to floats for radius, width, height Tests Add json validation to tests Packaging Upper bound to zarr version -------------------------------------------------------------------------------- ChangeLog: * Fri Feb 7 2025 Benjamin A. Beasley <code@xxxxxxxxxxxxxxxxxx> - 0.2.25-2 - Conditionalize Zarr BuildRequires and associated tests * Fri Feb 7 2025 Benjamin A. Beasley <code@xxxxxxxxxxxxxxxxxx> - 0.2.25-1 - Update to 0.2.25 (close RHBZ#2344205) * Sat Jan 18 2025 Fedora Release Engineering <releng@xxxxxxxxxxxxxxxxx> - 0.2.24-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild -------------------------------------------------------------------------------- References: [ 1 ] Bug #2344205 - python-probeinterface-0.2.25 is available https://bugzilla.redhat.com/show_bug.cgi?id=2344205 -------------------------------------------------------------------------------- This update can be installed with the "dnf" update program. Use su -c 'dnf upgrade --advisory FEDORA-2025-ab645217a4' at the command line. For more information, refer to the dnf documentation available at http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label All packages are signed with the Fedora Project GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------
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