Fedora 40 Update: python-pynwb-2.8.3-2.fc40

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Fedora Update Notification
FEDORA-2024-f7ae6526c2
2024-12-28 03:09:54.014844+00:00
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Name        : python-pynwb
Product     : Fedora 40
Version     : 2.8.3
Release     : 2.fc40
URL         : https://github.com/NeurodataWithoutBorders/pynwb
Summary     : Package for working with Neurodata stored in the NWB format
Description :
PyNWB is a Python package for working with NWB files. It provides a high-level
API for efficiently working with Neurodata stored in the NWB format.
https://pynwb.readthedocs.io/en/latest/

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Update Information:

PyNWB 2.8.3 (November 19, 2024)
Enhancements and minor changes
Added NWBHDF5IO.read_nwb convenience method to simplify reading an NWB file.
Removed unused references to region references and builders in preparation for
changes in HDMF 4.0.
Made gain an optional argument for PatchClampSeries to match the schema.
Added warning when writing files with NWBHDF5IO without the .nwb extension.
Cache global type map to speed import 3X.
Bug fixes
Fixed bug in how ElectrodeGroup.__init__ validates its position argument.
Changed SpatialSeries.reference_frame from required to optional as specified in
the schema.
Documentation and tutorial enhancements
Added documentation example for SpikeEventSeries.
Added documentation example for AnnotationSeries.
Added documentation example for DecompositionSeries.
PyNWB 2.8.2 (September 9, 2024)
Enhancements and minor changes
Added support for numpy 2.0.
Make get_cached_namespaces_to_validate a public function
Documentation and tutorial enhancements
Added pre-release pull request instructions to release process documentation
Added section on how to use the family driver in h5py for splitting data across
multiple files
Bug fixes
Fixed can_read method to return False if no nwbfile version can be found
Changed epoch_tags to be a NWBFile property instead of constructor argument.
Exposed option to not cache the spec in NWBHDF5IO.export.
PyNWB 2.8.1 (July 3, 2024)
Documentation and tutorial enhancements
Simplified the introduction to NWB tutorial.
Simplified the ecephys and ophys tutorials. #1915
Add comments to src/pynwb/io/file.py to improve developer documentation.
Bug fixes
Fixed use of channel_conversion in TimeSeries get_data_in_units.
PyNWB 2.8.0 (May 28, 2024)
Enhancements and minor changes
Set rate default value inside mock_ElectricalSeries to avoid having to set
rate=None explicitly when passing timestamps.
Integrate validation through the TypeConfigurator.
Exposed aws_region to NWBHDF5IO.
Bug fixes
Revert changes in PyNWB 2.7.0 that allow datetimes without a timezone and
without a time while issues with DANDI upload of NWB files missing timezone are
resolved.
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ChangeLog:

* Thu Dec 19 2024 Sandro <devel@xxxxxxxxxxxxx> - 2.8.3-1
- Update to 2.8.3
- Close RHBZ#2332199 (NumPy 2.x)
* Mon May 13 2024 Sandro <devel@xxxxxxxxxxxxx> - 2.7.0-2
- Add Packit config
* Mon May 13 2024 Sandro <devel@xxxxxxxxxxxxx> - 2.7.0-1
- Update to 2.7.0
- Works with pytest >= 8 (RHBZ#2275107)
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This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade --advisory FEDORA-2024-f7ae6526c2' at the command
line. For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label

All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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