Fedora 40 Update: python-snakemake-interface-storage-plugins-3.3.0-1.fc40

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Fedora Update Notification
FEDORA-2024-2f70f60492
2024-09-02 02:50:41.217436
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Name        : python-snakemake-interface-storage-plugins
Product     : Fedora 40
Version     : 3.3.0
Release     : 1.fc40
URL         : https://github.com/snakemake/snakemake-interface-storage-plugins
Summary     : Stable interface for interactions between Snakemake and its storage plugins
Description :
This package provides a stable interface for interactions between Snakemake and
its storage plugins.

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Update Information:

python-snakemake-executor-plugin-kubernetes 0.2.0 (2024-08-15)
Features
PVC support for kubernetes
Bug Fixes
handle cases when running inside a kubernetes cluster
python-snakemake-executor-plugin-slurm 0.10.0 (2024-08-23)
Features
in job stability
Bug Fixes
add --parsable to sbatch call for a more robust output parsing
issue #109 - preemption is no longer considered a failed status
python-snakemake-interface-storage-plugins 3.3.0 (2024-08-19)
Features
add postprocess_query method for optionally modifying the query before a storage
object is created
python-snakemake-storage-plugin-fs 1.0.6 (2024-08-16)
Bug Fixes
clean up target path upon storage in order to avoid merges of directories
python-snakemake-storage-plugin-gcs 1.1.1 (2024-08-19)
Bug Fixes
allow both gs:// and gcs:// as query scheme; internally normalize to gs:// for
compatibility with google cloud tools
python-snakemake-storage-plugin-gcs 1.1.0 (2024-08-19)
Features
list storage candidates
Bug Fixes
fixing the directory() issue due to uploading the local_prefix instead of GCS
prefix.
python-snakemake-storage-plugin-xrootd 0.1.3 (2024-08-20)
Bug Fixes
Fix XRootD storage plugin at least for file access
update dependencies
snakemake 8.18.2 (2024-08-21)
Documentation
recommending raw strings to get rid of syntax warnings
tutorial polishing
snakemake 8.18.1 (2024-08-19)
Bug Fixes
use query from storage object in order to be able to reflect possible
modifications (via StorageProvider.postprocess_query())
Documentation
clarify config file location
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ChangeLog:

* Wed Aug 21 2024 Packit <hello@xxxxxxxxxx> - 3.3.0-1
- Update to 3.3.0 upstream release
- Resolves: rhbz#2306508
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References:

  [ 1 ] Bug #2306485 - python-snakemake-storage-plugin-xrootd-0.1.3 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2306485
  [ 2 ] Bug #2306508 - python-snakemake-interface-storage-plugins-3.3.0 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2306508
  [ 3 ] Bug #2307479 - python-snakemake-executor-plugin-kubernetes-0.2.0 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2307479
  [ 4 ] Bug #2307480 - snakemake-8.18.2 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2307480
  [ 5 ] Bug #2307481 - python-snakemake-storage-plugin-gcs-1.1.1 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2307481
  [ 6 ] Bug #2307482 - python-snakemake-storage-plugin-fs-1.0.6 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2307482
  [ 7 ] Bug #2307734 - python-snakemake-executor-plugin-slurm-0.10.0 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2307734
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This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade --advisory FEDORA-2024-2f70f60492' at the command
line. For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label

All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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