-------------------------------------------------------------------------------- Fedora Update Notification FEDORA-2024-06f8cfde57 2024-07-27 01:45:37.014353 -------------------------------------------------------------------------------- Name : python-probeinterface Product : Fedora 40 Version : 0.2.23 Release : 1.fc40 URL : https://github.com/SpikeInterface/probeinterface Summary : Handles probe layout, geometry, and wiring to device Description : A Python package to handle the layout, geometry, and wiring of silicon probes for extracellular electrophysiology experiments. Goals Make a lightweight package to handle: â?¢ probe contact geometry (both 2D and 3D layouts) â?¢ probe shape (contour of the probe, shape of channel contact, â?¦) â?¢ probe wiring to device (the physical layout often doesnâ??t match the channel ordering) â?¢ combining several probes into a device with global geometry + global wiring â?¢ exporting probe geometry data into JSON files â?¢ loading existing probe geometry files (Neuronexus, imec, Cambridge Neurotechâ?¦) Started here Bonus: â?¢ optional plotting (based on matplotlib) â?¢ load/save geometry using common formats (PRB, CSV, NWB, â?¦) â?¢ handle SI length units correctly um/mm/â?¦ Target users/project: â?¢ spikeinterface team: integrate this into spikeextractor for channel location â?¢ neo team: handle array_annotations for AnalogSignal â?¢ spikeforest team: use this package for plotting probe activity â?¢ phy team: integrate for probe display â?¢ spyking-circus team: handle probe with this package â?¢ kilosort team: handle probe with this package â?¢ tridesclous team: handle probe with this package â?¢ open ephys team: automatically generate channel map configuration files -------------------------------------------------------------------------------- Update Information: Update to 0.2.23 (close RHBZ#2298480) Add part number PRB_1_2_0480_2 for newly-manufactured Neuropixels 1.0 probes probeinterface 0.2.22 â?? Jul, 15th 2024 Bugs Fix broken link in ex_11_automatic_wiringâ??.py Load Open Ephys probe when multiple signal chains are present Features Add dtype information to to_numpy function docstring documentation Add circular auto-shape option Add automatic probe layout for 3brain/biocam recordings Add NP1016 probe (same as 1015) Add json schema for probe json file Probe reader for Neuropixels 1.0 in SpikeGadgets .rec file. Refactoring Move get_auto_lims function to utils Deprecate plot_probe_group in favor of plot_probegroup -------------------------------------------------------------------------------- ChangeLog: * Thu Jul 18 2024 Benjamin A. Beasley <code@xxxxxxxxxxxxxxxxxx> - 0.2.23-1 - Update to 0.2.23 (close RHBZ#2298480) * Mon Jul 15 2024 Benjamin A. Beasley <code@xxxxxxxxxxxxxxxxxx> - 0.2.22-1 - Update to 0.2.22 (close RHBZ#2297975) * Mon Jun 17 2024 Python Maint <python-maint@xxxxxxxxxx> - 0.2.21-3 - Rebuilt for Python 3.13 -------------------------------------------------------------------------------- References: [ 1 ] Bug #2297975 - python-probeinterface-0.2.22 is available https://bugzilla.redhat.com/show_bug.cgi?id=2297975 [ 2 ] Bug #2298480 - python-probeinterface-0.2.23 is available https://bugzilla.redhat.com/show_bug.cgi?id=2298480 -------------------------------------------------------------------------------- This update can be installed with the "dnf" update program. Use su -c 'dnf upgrade --advisory FEDORA-2024-06f8cfde57' at the command line. For more information, refer to the dnf documentation available at http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label All packages are signed with the Fedora Project GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------
-- _______________________________________________ package-announce mailing list -- package-announce@xxxxxxxxxxxxxxxxxxxxxxx To unsubscribe send an email to package-announce-leave@xxxxxxxxxxxxxxxxxxxxxxx Fedora Code of Conduct: https://docs.fedoraproject.org/en-US/project/code-of-conduct/ List Guidelines: https://fedoraproject.org/wiki/Mailing_list_guidelines List Archives: https://lists.fedoraproject.org/archives/list/package-announce@xxxxxxxxxxxxxxxxxxxxxxx Do not reply to spam, report it: https://pagure.io/fedora-infrastructure/new_issue
