Fedora 39 Update: python-pyspike-0.8.0-1.fc39

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Fedora Update Notification
FEDORA-2024-e252e84e50
2024-03-06 01:04:35.905343
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Name        : python-pyspike
Product     : Fedora 39
Version     : 0.8.0
Release     : 1.fc39
URL         : https://github.com/mariomulansky/PySpike
Summary     : Library for the numerical analysis of spike train similarity
Description :
PySpike is a Python library for the numerical analysis of spike train
similarity. Its core functionality is the implementation of the ISI-distance[1]
and SPIKE-distance[2], SPIKE-Synchronization [3], as well as their adaptive
generalizations[4]. It provides functions to compute multivariate profiles,
distance matrices, as well as averaging and general spike train processing. All
computation intensive parts are implemented in C via Cython to reach a
competitive performance (factor 100-200 over plain Python).

PySpike provides the same fundamental functionality as the SPIKY framework for
Matlab, which additionally contains spike-train generators, more spike train
distance measures and many visualization routines.

If you use PySpike in your research, please cite our SoftwareX publication on
PySpike:

Mario Mulansky, Thomas Kreuz, *PySpike - A Python library for analyzing spike
train synchrony*, Software X 5, 183 (2016)

Additionally, depending on the used methods: ISI-distance [1], SPIKE-distance
[2], SPIKE-Synchronization [3], or their adaptive generalizations [4], please
cite one or more of the following publications:

[1] Kreuz T, Haas JS, Morelli A, Abarbanel HDI, Politi A, Measuring spike train
synchrony. J Neurosci Methods 165, 151 (2007)

[2] Kreuz T, Chicharro D, Houghton C, Andrzejak RG, Mormann F, Monitoring spike
train synchrony. J Neurophysiol 109, 1457 (2013)

[3] Kreuz T, Mulansky M and Bozanic N, *SPIKY: A graphical user interface for
monitoring spike train synchrony*, J Neurophysiol 113, 3432 (2015)

[4] Satuvuori E, Mulansky M, Bozanic N, Malvestio I, Zeldenrust F, Lenk K, and
Kreuz T, Measures of spike train synchrony for data with multiple time-scales,
J Neurosci Methods 287, 25 (2017)

Documentation is available at http://mariomulansky.github.io/PySpike/

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Update Information:

Update to 0.8.0: https://github.com/mariomulansky/PySpike/compare/0.7.0...0.8.0
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ChangeLog:

* Sun Feb 25 2024 Benjamin A. Beasley <code@xxxxxxxxxxxxxxxxxx> - 0.8.0-1
- Update to 0.8.0 (close RHBZ#2222843)
- Update License to SPDX
- Run the tests
- Support Cython 3 (fix RHBZ#2254038)
- Package examples as documentation
* Fri Jan 26 2024 Fedora Release Engineering <releng@xxxxxxxxxxxxxxxxx> - 0.7.0-11
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Mon Jan 22 2024 Fedora Release Engineering <releng@xxxxxxxxxxxxxxxxx> - 0.7.0-10
- Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
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References:

  [ 1 ] Bug #2222843 - python-pyspike-0.8.0 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=2222843
  [ 2 ] Bug #2254038 - python-pyspike uses Cython 0.29 to build, please update to Cython 3
        https://bugzilla.redhat.com/show_bug.cgi?id=2254038
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This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade --advisory FEDORA-2024-e252e84e50' at the command
line. For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label

All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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