-------------------------------------------------------------------------------- Fedora Update Notification FEDORA-2023-e8f79b0cf1 2023-11-03 18:20:20.953298 -------------------------------------------------------------------------------- Name : python-pynwb Product : Fedora 39 Version : 2.5.0 Release : 2.fc39 URL : https://github.com/NeurodataWithoutBorders/pynwb Summary : Package for working with Neurodata stored in the NWB format Description : PyNWB is a Python package for working with NWB files. It provides a high-level API for efficiently working with Neurodata stored in the NWB format. https://pynwb.readthedocs.io/en/latest/ -------------------------------------------------------------------------------- Update Information: Update `python-hdmf` to 3.10.0 and `python-pynwb` to 2.5.0. ----- ## HDMF 3.10.0 (October 3, 2023) Since version 3.9.1 should have been released as 3.10.0 but failed to release on PyPI and conda-forge, this release will increase the minor version number to 3.10.0. See the 3.9.1 release notes below for new features. ### Bug fixes - Fixed issue with testing and deployment of releases. [#957](https://github.com/hdmf-dev/hdmf/pull/957) ## HDMF 3.9.1 (September 29, 2023) ### Enhancements - Updated `TermSet` to be used with `TermSetWrapper`, allowing for general use of validation for datasets and attributes. This also brings updates to `HERD` integration and updates on `write` to easily add references for wrapped datasets/attributes. @mavaylon1 [#950](https://github.com/hdmf-dev/hdmf/pull/950) ### Minor improvements - Removed warning when namespaces are loaded and the attribute marking where the specs are cached is missing. [#926](https://github.com/hdmf-dev/hdmf/pull/926) ### Bug fixes - Fixed bug allowing `DynamicTable` to be constructed with empty `id` column when initializing all columns via `AbstractDataChunkIterator` objects. @oruebel [#953](https://github.com/hdmf-dev/hdmf/pull/953) ----- ## PyNWB 2.5.0 (August 18, 2023) ### Enhancements and minor changes - Add `TimeSeries.get_timestamps()` - Add `TimeSeries.get_data_in_units()` - Updated `ExternalResources` name change to `HERD`, along with HDMF 3.9.0 being the new minimum. ### Documentation and tutorial enhancements - Updated streaming tutorial to ensure code is run on tests and clarify text. - Fixed minor documentation build warnings and broken links to `basic_trials` tutorial ## PyNWB 2.4.1 (July 26, 2023) - Stop running validation tests as part of integration tests. They cause issues in CI and can be run separately. ## PyNWB 2.4.0 (July 23, 2023) ### Enhancements and minor changes - Add support for `ExternalResources`. - Update links for making a release. ### Bug fixes - Fixed sphinx-gallery setting to correctly display index in the docs with sphinx- gallery>=0.11. ### Documentation and tutorial enhancements - Added thumbnail for Optogentics tutorial. - Update and fix errors in tutorials. -------------------------------------------------------------------------------- ChangeLog: * Thu Oct 5 2023 Benjamin A. Beasley <code@xxxxxxxxxxxxxxxxxx> - 2.5.0-2 - Patch for python-hdmf 3.10.0 compatibility * Thu Oct 5 2023 Benjamin A. Beasley <code@xxxxxxxxxxxxxxxxxx> - 2.5.0-1 - Update to 2.5.0 -------------------------------------------------------------------------------- References: [ 1 ] Bug #2241592 - python-hdmf-3.10.0 is available https://bugzilla.redhat.com/show_bug.cgi?id=2241592 -------------------------------------------------------------------------------- This update can be installed with the "dnf" update program. Use su -c 'dnf upgrade --advisory FEDORA-2023-e8f79b0cf1' at the command line. For more information, refer to the dnf documentation available at http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label All packages are signed with the Fedora Project GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys -------------------------------------------------------------------------------- _______________________________________________ package-announce mailing list -- package-announce@xxxxxxxxxxxxxxxxxxxxxxx To unsubscribe send an email to package-announce-leave@xxxxxxxxxxxxxxxxxxxxxxx Fedora Code of Conduct: https://docs.fedoraproject.org/en-US/project/code-of-conduct/ List Guidelines: https://fedoraproject.org/wiki/Mailing_list_guidelines List Archives: https://lists.fedoraproject.org/archives/list/package-announce@xxxxxxxxxxxxxxxxxxxxxxx Do not reply to spam, report it: https://pagure.io/fedora-infrastructure/new_issue
