Re: python 3.5 openmp issue

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----- Original Message -----
> From: "Orion Poplawski" <orion@xxxxxxxxxxxxx>
> To: "Fedora Python SIG" <python-devel@xxxxxxxxxxxxxxxxxxxxxxx>, "Robert Kuska" <rkuska@xxxxxxxxxx>, "Matej Stuchlik"
> <mstuchli@xxxxxxxxxx>, "Development discussions related to Fedora" <devel@xxxxxxxxxxxxxxxxxxxxxxx>
> Sent: Tuesday, November 10, 2015 10:43:21 PM
> Subject: python 3.5 openmp issue
> 
> h5py build is failing with python 3.5:
> 
> creating
> build/temp.linux-x86_64-3.5/builddir/build/BUILD/python3-h5py-2.5.0-5.fc24/h5py
> gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g -pipe -Wall
> -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
> -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches
> -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic
> -D_GNU_SOURCE -fPIC -fwrapv -O2 -g -pipe -Wall -Werror=format-security
> -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong
> --param=ssp-buffer-size=4 -grecord-gcc-switches
> -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp
> -fPIC -DH5_USE_16_API -I/builddir/build/BUILD/python3-h5py-2.5.0-5.fc24/lzf
> -I/opt/local/include -I/usr/local/include
> -I/usr/lib64/python3.5/site-packages/numpy/core/include
> -I/usr/include/python3.5m -c
> /builddir/build/BUILD/python3-h5py-2.5.0-5.fc24/h5py/defs.c -o
> build/temp.linux-x86_64-3.5/builddir/build/BUILD/python3-h5py-2.5.0-5.fc24/h5py/defs.o
> In file included from /usr/include/python3.5m/pyatomic.h:12:0,
>                  from /usr/include/python3.5m/Python.h:53,
>                  from
> /builddir/build/BUILD/python3-h5py-2.5.0-5.fc24/h5py/defs.c:36:
> /usr/lib/gcc/x86_64-redhat-linux/5.2.1/include/stdatomic.h:40:1: sorry,
> unimplemented: '_Atomic' with OpenMP
>  typedef _Atomic _Bool atomic_bool;
>  ^
> /usr/lib/gcc/x86_64-redhat-linux/5.2.1/include/stdatomic.h:41:1: sorry,
> unimplemented: '_Atomic' with OpenMP
>  typedef _Atomic char atomic_char;
>  ^
> 
> This appears to be https://bugs.python.org/issue25150 for which there appears
> to be a patch.  Could this be applied please?
> 
> Thanks.

Here you go
http://koji.fedoraproject.org/koji/buildinfo?buildID=698435

> 
> --
> Orion Poplawski
> Technical Manager                     303-415-9701 x222
> NWRA, Boulder/CoRA Office             FAX: 303-415-9702
> 3380 Mitchell Lane                       orion@xxxxxxxx
> Boulder, CO 80301                   http://www.nwra.com
> 

Regards,

Robert Kuska
{rkuska}
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