Re: 【cephfs】cephfs hung when scp/rsync large files

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On Thu, Dec 6, 2018 at 2:24 PM Li,Ning <lining916740672@xxxxxxxxxx> wrote:
>
> Hi,
>
> Overload on the storage nodes that run OSDs is normal  during the whole copy.
>
> The memory pressure is on the client side.  I think it may not work to turn the dirty_ratio and dirty_background_ratio to small on the ceph storage server side.
>
>
> Anyway,I will have a try.
>
>
> Best Regards
> Li, Ning
>
>
>
> > On Dec 6, 2018, at 11:41, Yan, Zheng <ukernel@xxxxxxxxx> wrote:
> >
> > On Wed, Dec 5, 2018 at 2:33 PM NingLi <lining916740672@xxxxxxxxxx> wrote:
> >>
> >> Hi all,
> >>
> >> We found that some process writing cephfs  will hang for a long time (> 120s)  when uploading(scp/rsync) large files(totally 50G ~ 300G)to the app node's cephfs mountpoint.
> >>
> >> This problem is not always reproduciable. But when this problem occurs, the web(nginx) or some other services can’t be access, it’s embarrassing.
> >>
> >>
> >> Please give some tips.
> >>
> >>
> >> We are using  ceph version 13.2.1  and  3.10.0-693.el7.x86_64 kernel.
> >>
> >>
> >> When this problem occurs, the memory pressure is a bit high.
> >> # free -h
> >>              total        used        free         shared  buff/cache   available
> >> Mem:        30G       11G        230M        3.3M         18G         18G
> >> Swap:         0B        0B          0B
> >>
> >> # mpstat -P ALL
> >> Average:     CPU    %usr   %nice    %sys %iowait    %irq   %soft  %steal  %guest  %gnice   %idle
> >> Average:     all         3.80       0.04   1.46    55.12    0.00    0.08    0.00    0.00    0.00   39.49
> >> Average:       0        1.52       0.00    0.51    97.98    0.00    0.00    0.00    0.00    0.00    0.00
> >> Average:       1        13.07      0.00   1.51    0.00      0.00    0.00    0.00    0.00    0.00   85.43
> >> Average:       2        3.00       0.00    3.00    0.50      0.00    0.00    0.00    0.00    0.00   93.50
> >> Average:       3        2.50       0.00    2.00    0.00      0.00    0.00    0.00    0.00    0.00   95.50
> >> Average:       4        1.50       0.50    1.50    96.00    0.00    0.50    0.00    0.00    0.00    0.00
> >> Average:       5       0.50       0.00    1.01    32.16     0.00    0.00    0.00    0.00    0.00   66.33
> >> Average:       6        2.49       0.00    2.49    0.00     0.00    0.50    0.00    0.00    0.00   94.53
> >> Average:       7       1.52       0.00    0.51     97.98    0.00    0.00    0.00    0.00    0.00    0.00
> >> Average:       8       1.50       0.00    1.50     97.00    0.00    0.00    0.00    0.00    0.00    0.00
> >> Average:       9       14.07     0.00    2.01     46.23    0.00    0.00    0.00    0.00    0.00   37.69
> >> Average:      10       2.00      0.00    0.50     97.50    0.00    0.00    0.00    0.00    0.00    0.00
> >> Average:      11       2.01      0.00    1.01     96.98    0.00    0.00    0.00    0.00    0.00    0.00
> >>
> >> We can see some process in state ‘D’ for a long time.  here are 2 fragments in dmesg.
> >>
> >
> > try setting vm.dirty_ration and vm.dirty_background_ration of machines
> > that run OSDs to smaller value.
> >
> >> [Fri Nov 30 15:10:43 2018] INFO: task java:11662 blocked for more than 120 seconds.
> >> [Fri Nov 30 15:10:43 2018] "echo 0 > /proc/sys/kernel/hung_task_timeout_secs" disables this message.
> >> [Fri Nov 30 15:10:43 2018] java            D ffffffff816a4180     0 11662  10409 0x00000180
> >> [Fri Nov 30 15:10:43 2018]  ffff8805f4febbd0 0000000000000082 ffff8807e2edcf10 ffff8805f4febfd8
> >> [Fri Nov 30 15:10:43 2018]  ffff8805f4febfd8 ffff8805f4febfd8 ffff8807e2edcf10 ffff88086df56cc0
> >> [Fri Nov 30 15:10:43 2018]  0000000000000000 7fffffffffffffff ffff88087ffc3be8 ffffffff816a4180
> >> [Fri Nov 30 15:10:43 2018] Call Trace:
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a4180>] ? bit_wait+0x50/0x50
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a6059>] schedule+0x29/0x70
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a3b69>] schedule_timeout+0x239/0x2c0
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81190541>] ? pagevec_lookup_tag+0x21/0x30
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffffc082b598>] ? ceph_writepages_start+0x1298/0x1520 [ceph]
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff810e939c>] ? ktime_get_ts64+0x4c/0xf0
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a4180>] ? bit_wait+0x50/0x50
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a56dd>] io_schedule_timeout+0xad/0x130
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a5778>] io_schedule+0x18/0x20
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a4191>] bit_wait_io+0x11/0x50
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816a3cb5>] __wait_on_bit+0x65/0x90
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81181cb1>] wait_on_page_bit+0x81/0xa0
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff810b19d0>] ? wake_bit_function+0x40/0x40
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81181de1>] __filemap_fdatawait_range+0x111/0x190
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff811b0d79>] ? do_numa_page+0x159/0x1e0
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff8118f42e>] ? do_writepages+0x1e/0x40
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81181e74>] filemap_fdatawait_range+0x14/0x30
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81183db6>] filemap_write_and_wait_range+0x56/0x90
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffffc083326c>] ceph_fsync+0x6c/0x510 [ceph]
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81137273>] ? __secure_computing+0x73/0x240
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff8111f5c6>] ? __audit_syscall_exit+0x1e6/0x280
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81231d85>] do_fsync+0x65/0xa0
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff81232083>] SyS_fdatasync+0x13/0x20
> >> [Fri Nov 30 15:10:43 2018]  [<ffffffff816b1d4e>] tracesys+0xd9/0xde
> >>
> >>
> >> [Fri Nov 30 15:12:43 2018] INFO: task prometheus:9919 blocked for more than 120 seconds.
> >> [Fri Nov 30 15:12:43 2018] "echo 0 > /proc/sys/kernel/hung_task_timeout_secs" disables this message.
> >> [Fri Nov 30 15:12:43 2018] prometheus      D ffff8807e87dbad8     0  9919   9879 0x00000080
> >> [Fri Nov 30 15:12:43 2018]  ffff8807e87db970 0000000000000082 ffff8803e273cf10 ffff8807e87dbfd8
> >> [Fri Nov 30 15:12:43 2018]  ffff8807e87dbfd8 ffff8807e87dbfd8 ffff8803e273cf10 ffff88046e716cc0
> >> [Fri Nov 30 15:12:43 2018]  0000000000000000 7fffffffffffffff ffffffff816a4180 ffff8807e87dbad8
> >> [Fri Nov 30 15:12:43 2018] Call Trace:
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a4180>] ? bit_wait+0x50/0x50
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a6059>] schedule+0x29/0x70
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a3b69>] schedule_timeout+0x239/0x2c0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff81090007>] ? local_bh_enable+0x17/0x20
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a4180>] ? bit_wait+0x50/0x50
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a56dd>] io_schedule_timeout+0xad/0x130
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a5778>] io_schedule+0x18/0x20
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a4191>] bit_wait_io+0x11/0x50
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816a3eaf>] __wait_on_bit_lock+0x5f/0xc0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff81182094>] __lock_page+0x74/0x90
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff810b19d0>] ? wake_bit_function+0x40/0x40
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff81182a34>] __find_lock_page+0x54/0x70
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff811836e2>] grab_cache_page_write_begin+0x62/0xd0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffffc082a203>] ceph_write_begin+0x43/0xe0 [ceph]
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff811824ce>] generic_file_buffered_write+0x11e/0x2a0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffffc08259c4>] ceph_aio_write+0xac4/0xc60 [ceph]
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff8160417a>] ? inet_recvmsg+0x7a/0xa0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff811feb3d>] do_sync_write+0x8d/0xd0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff811ff5fd>] vfs_write+0xbd/0x1e0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff8120040f>] SyS_write+0x7f/0xe0
> >> [Fri Nov 30 15:12:43 2018]  [<ffffffff816b1b49>] system_call_fastpath+0x16/0x1b
> >>
> >>
> >> But the cephfs status shows healthy.
> >> # ceph -s
> >>  cluster:
> >>    id:     b27bc9a3-2e32-4782-b60f-b7901b0b26e5
> >>    health: HEALTH_OK
> >>
> >>  services:
> >>    mon: 2 daemons, quorum skyaxe-storage-0,skyaxe-storage-1
> >>    mgr: skyaxe-storage-0(active), standbys: skyaxe-storage-1
> >>    mds: cephfs-1/1/1 up  {0=skyaxe-storage-1=up:active}, 1 up:standby
> >>    osd: 8 osds: 8 up, 8 in
> >>
> >>  data:
> >>    pools:   2 pools, 512 pgs
> >>    objects: 599.7 k objects, 876 GiB
> >>    usage:   2.6 TiB used, 13 TiB / 15 TiB avail
> >>    pgs:     512 active+clean
> >>
> >>  io:
> >>    client:   3.7 KiB/s wr, 0 op/s rd, 1 op/s wr
> >>
> >>
> >> We can see some unfinished requests in osdc.
> >>
> >> #  cat /sys/kernel/debug/ceph/xxx/osdc
> >> REQUESTS 98 homeless 0
> >> 8529    osd1    1.1bfdee5       [1,7]/1 [1,7]/1 100000011be.00000000    0x400024        1       0'0     write
> >> 8532    osd1    1.2d81c338      [1,6]/1 [1,6]/1 100000011c0.00000000    0x400024        1       0'0     write
> >> 8536    osd1    1.49324f26      [1,4]/1 [1,4]/1 100000011c4.00000000    0x400024        1       0'0     write
> >> 8542    osd1    1.1403106f      [1,7]/1 [1,7]/1 100000011c8.00000000    0x400024        1       0'0     write
> >> 8549    osd1    1.ea273113      [1,4]/1 [1,4]/1 100000011ce.00000000    0x400024        1       0'0     write
> >> 8562    osd1    1.f2d68e9a      [1,5]/1 [1,5]/1 100000011d8.00000000    0x400024        1       0'0     write
> >> 8566    osd1    1.1f212283      [1,4]/1 [1,4]/1 100000011db.00000000    0x400024        1       0'0     write
> >> 8568    osd1    1.2e1984e7      [1,5]/1 [1,5]/1 100000011de.00000000    0x400024        1       0'0     write
> >> 8576    osd1    1.da7e63d0      [1,5]/1 [1,5]/1 100000011e1.00000000    0x400024        1       0'0     write
> >> 8581    osd1    1.3b0d280       [1,4]/1 [1,4]/1 100000011e8.00000000    0x400024        1       0'0     write
> >> 8582    osd1    1.80227f0b      [1,5]/1 [1,5]/1 100000011ea.00000000    0x400024        1       0'0     write
> >> 8593    osd1    1.1efd9391      [1,6]/1 [1,6]/1 100000011ef.00000000    0x400024        1       0'0     write
> >> 8594    osd1    1.3db6e880      [1,4]/1 [1,4]/1 100000011f0.00000000    0x400024        1       0'0     write
> >> 8611    osd1    1.6d20c41d      [1,4]/1 [1,4]/1 1000000028c.00000000    0x400024        1       0'0     write
> >> 8612    osd1    1.6d20c41d      [1,4]/1 [1,4]/1 1000000028c.00000000    0x400024        1       0'0     write
> >> 8616    osd1    1.f4d90a4d      [1,7]/1 [1,7]/1 10000001206.00000000    0x400024        1       0'0     write
> >> 8619    osd1    1.740514fe      [1,5]/1 [1,5]/1 10000001208.00000000    0x400024        1       0'0     write
> >> 8630    osd1    1.d5fbabe0      [1,6]/1 [1,6]/1 10000001216.00000000    0x400024        1       0'0     write
> >> 8631    osd1    1.daf28f83      [1,4]/1 [1,4]/1 10000001217.00000000    0x400024        1       0'0     write
> >> 8635    osd1    1.d29e01a6      [1,5]/1 [1,5]/1 1000000121a.00000000    0x400024        1       0'0     write
> >> 8640    osd1    1.2de0ff63      [1,7]/1 [1,7]/1 10000001220.00000000    0x400024        1       0'0     write
> >> 8658    osd1    1.2f91206f      [1,7]/1 [1,7]/1 1000000122c.00000000    0x400064        1       0'0     write,startsync
> >> ...
> >>

how long did these osd requests take? If some requests take too long,
use 'ceph daemon osd.x dump dump_blocked_ops/dump_ops_in_flight' to
check


>>
> >> Here is our ceph config:
> >>
> >> # cat /etc/ceph/ceph.conf
> >> [global]
> >> fsid = b27bc9a3-2e32-4782-b60f-b7901b0b26e5
> >> mon_initial_members = skyaxe-storage-0, skyaxe-storage-1
> >> mon_host = 10.0.30.111,10.0.30.112
> >> auth_cluster_required = cephx
> >> auth_service_required = cephx
> >> auth_client_required = cephx
> >>
> >> osd_pool_default_size = 2
> >> public_network = 10.0.30.0/24
> >> cluster_network = 10.0.40.0/24
> >> osd_pool_default_min_size = 1
> >>
> >> max_open_files = 131072
> >>
> >> [osd]
> >> osd_journal_size = 56320
> >>
> >> journal_max_write_bytes = 1073741824
> >> journal_max_write_entries = 10000
> >> journal_queue_max_ops = 50000
> >> journal_queue_max_bytes = 10737418240
> >>
> >> osd_mkfs_type = xfs
> >> osd_mkfs_options_xfs = -f
> >> osd_mount_options_xfs = "rw,noexec,nodev,noatime,nodiratime,nobarrier"
> >>
> >> osd_max_write_size = 512
> >> osd_client_message_size_cap = 2147483648
> >> osd_deep_scrub_stride = 131072
> >> osd_op_threads = 8
> >> osd_disk_threads = 4
> >> osd_map_cache_size = 1024
> >> osd_map_cache_bl_size = 128
> >> osd_recovery_op_priority = 4
> >> osd_recovery_max_active = 10
> >> osd_max_backfills = 4
> >>
> >> —
> >> Best Regards
> >> Li, Ning
> >>
> >>
> >>
> >> _______________________________________________
> >> ceph-users mailing list
> >> ceph-users@xxxxxxxxxxxxxx
> >> http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>
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