Re: inconsistent PG -> unfound objects on an erasure coded system

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Jeffrey: can you confirm through the admin socket the versions running
on each of those osds and include the output in your reply?  I have a
theory about what's causing the objects to be erroneously reported as
inconsistent, but it requires that osd.307 be running a different
version.
-Sam

On Mon, Mar 7, 2016 at 3:34 PM, Samuel Just <sjust@xxxxxxxxxx> wrote:
> Well, the fact that different objects are being selected as
> inconsistent strongly suggests that the objects are not actually
> inconsistent.  Thus, at the moment my assumption is a bug in scrub...
> -Sam
>
> On Mon, Mar 7, 2016 at 3:31 PM, Shinobu Kinjo <shinobu.kj@xxxxxxxxx> wrote:
>> What could cause this kind of unexpected behaviour?
>> Any assumption??
>> Sorry for interrupting you.
>>
>> Cheers,
>> S
>>
>> On Tue, Mar 8, 2016 at 8:19 AM, Samuel Just <sjust@xxxxxxxxxx> wrote:
>>> Hmm, at the end of the log, the pg is still inconsistent.  Can you
>>> attach a ceph pg query on that pg?
>>> -Sam
>>>
>>> On Mon, Mar 7, 2016 at 3:05 PM, Samuel Just <sjust@xxxxxxxxxx> wrote:
>>>> If so, that strongly suggests that the pg was actually never
>>>> inconsistent in the first place and that the bug is in scrub itself
>>>> presumably getting confused about an object during a write.  The next
>>>> step would be to get logs like the above from a pg as it scrubs
>>>> transitioning from clean to inconsistent.  If it's really a race
>>>> between scrub and a write, it's probably just non-deterministic, you
>>>> could set logging on a set of osds and continuously scrub any pgs
>>>> which only map to those osds until you reproduce the problem.
>>>> -Sam
>>>>
>>>> On Mon, Mar 7, 2016 at 2:44 PM, Samuel Just <sjust@xxxxxxxxxx> wrote:
>>>>> So after the scrub, it came up clean?  The inconsistent/missing
>>>>> objects reappeared?
>>>>> -Sam
>>>>>
>>>>> On Mon, Mar 7, 2016 at 2:33 PM, Jeffrey McDonald <jmcdonal@xxxxxxx> wrote:
>>>>>> Hi Sam,
>>>>>>
>>>>>> I've done as you requested:
>>>>>>
>>>>>> pg 70.459 is active+clean+inconsistent, acting [307,210,273,191,132,450]
>>>>>>
>>>>>> # for i in 307 210 273 191 132 450 ; do
>>>>>>> ceph tell osd.$i injectargs  '--debug-osd 20 --debug-filestore 20
>>>>>>> --debug-ms 1'
>>>>>>> done
>>>>>> debug_osd=20/20 debug_filestore=20/20 debug_ms=1/1
>>>>>> debug_osd=20/20 debug_filestore=20/20 debug_ms=1/1
>>>>>> debug_osd=20/20 debug_filestore=20/20 debug_ms=1/1
>>>>>> debug_osd=20/20 debug_filestore=20/20 debug_ms=1/1
>>>>>> debug_osd=20/20 debug_filestore=20/20 debug_ms=1/1
>>>>>> debug_osd=20/20 debug_filestore=20/20 debug_ms=1/1
>>>>>>
>>>>>>
>>>>>> # date
>>>>>> Mon Mar  7 16:03:38 CST 2016
>>>>>>
>>>>>>
>>>>>> # ceph pg deep-scrub 70.459
>>>>>> instructing pg 70.459 on osd.307 to deep-scrub
>>>>>>
>>>>>>
>>>>>>
>>>>>> Scrub finished around
>>>>>>
>>>>>> # date
>>>>>> Mon Mar  7 16:13:03 CST 2016
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> I've tar'd+gziped the files which can be downloaded from here.   The logs
>>>>>> start a minute or two after today at 16:00.
>>>>>>
>>>>>> https://drive.google.com/folderview?id=0Bzz8TrxFvfema2NQUmotd1BOTnM&usp=sharing
>>>>>>
>>>>>>
>>>>>> Oddly(to me anyways), this pg is now active+clean:
>>>>>>
>>>>>> # ceph pg dump  | grep 70.459
>>>>>> dumped all in format plain
>>>>>> 70.459 21377 0 0 0 0 64515446306 3088 3088 active+clean 2016-03-07
>>>>>> 16:26:57.796537 279563'212832 279602:628151 [307,210,273,191,132,450] 307
>>>>>> [307,210,273,191,132,450] 307 279563'212832 2016-03-07 16:12:30.741984
>>>>>> 279563'212832 2016-03-07 16:12:30.741984
>>>>>>
>>>>>>
>>>>>>
>>>>>> Regards,
>>>>>> Jeff
>>>>>>
>>>>>>
>>>>>> On Mon, Mar 7, 2016 at 4:11 PM, Samuel Just <sjust@xxxxxxxxxx> wrote:
>>>>>>>
>>>>>>> I think the unfound object on repair is fixed by
>>>>>>> d51806f5b330d5f112281fbb95ea6addf994324e (not in hammer yet).  I
>>>>>>> opened http://tracker.ceph.com/issues/15002 for the backport and to
>>>>>>> make sure it's covered in ceph-qa-suite.  No idea at this time why the
>>>>>>> objects are disappearing though.
>>>>>>> -Sam
>>>>>>>
>>>>>>> On Mon, Mar 7, 2016 at 1:57 PM, Samuel Just <sjust@xxxxxxxxxx> wrote:
>>>>>>> > The one just scrubbed and now inconsistent.
>>>>>>> > -Sam
>>>>>>> >
>>>>>>> > On Mon, Mar 7, 2016 at 1:57 PM, Jeffrey McDonald <jmcdonal@xxxxxxx>
>>>>>>> > wrote:
>>>>>>> >> Do you want me to enable this for the pg already with unfound objects
>>>>>>> >> or the
>>>>>>> >> placement group just scrubbed and now inconsistent?
>>>>>>> >> Jeff
>>>>>>> >>
>>>>>>> >> On Mon, Mar 7, 2016 at 3:54 PM, Samuel Just <sjust@xxxxxxxxxx> wrote:
>>>>>>> >>>
>>>>>>> >>> Can you enable
>>>>>>> >>>
>>>>>>> >>> debug osd = 20
>>>>>>> >>> debug filestore = 20
>>>>>>> >>> debug ms = 1
>>>>>>> >>>
>>>>>>> >>> on all osds in that PG, rescrub, and convey to us the resulting logs?
>>>>>>> >>> -Sam
>>>>>>> >>>
>>>>>>> >>> On Mon, Mar 7, 2016 at 1:36 PM, Jeffrey McDonald <jmcdonal@xxxxxxx>
>>>>>>> >>> wrote:
>>>>>>> >>> > Here is a PG which just went inconsistent:
>>>>>>> >>> >
>>>>>>> >>> > pg 70.459 is active+clean+inconsistent, acting
>>>>>>> >>> > [307,210,273,191,132,450]
>>>>>>> >>> >
>>>>>>> >>> > Attached is the result of a pg query on this.   I will wait for your
>>>>>>> >>> > feedback before issuing a repair.
>>>>>>> >>> >
>>>>>>> >>> > From what I read, the inconsistencies are more likely the result of
>>>>>>> >>> > ntp,
>>>>>>> >>> > but
>>>>>>> >>> > all nodes have the local ntp master and all are showing sync.
>>>>>>> >>> >
>>>>>>> >>> > Regards,
>>>>>>> >>> > Jeff
>>>>>>> >>> >
>>>>>>> >>> > On Mon, Mar 7, 2016 at 3:15 PM, Gregory Farnum <gfarnum@xxxxxxxxxx>
>>>>>>> >>> > wrote:
>>>>>>> >>> >>
>>>>>>> >>> >> [ Keeping this on the users list. ]
>>>>>>> >>> >>
>>>>>>> >>> >> Okay, so next time this happens you probably want to do a pg query
>>>>>>> >>> >> on
>>>>>>> >>> >> the PG which has been reported as dirty. I can't help much beyond
>>>>>>> >>> >> that, but hopefully Kefu or David will chime in once there's a
>>>>>>> >>> >> little
>>>>>>> >>> >> more for them to look at.
>>>>>>> >>> >> -Greg
>>>>>>> >>> >>
>>>>>>> >>> >> On Mon, Mar 7, 2016 at 1:00 PM, Jeffrey McDonald <jmcdonal@xxxxxxx>
>>>>>>> >>> >> wrote:
>>>>>>> >>> >> > Hi Greg,
>>>>>>> >>> >> >
>>>>>>> >>> >> > I'm running the ceph version hammer,
>>>>>>> >>> >> > ceph version 0.94.5 (9764da52395923e0b32908d83a9f7304401fee43)
>>>>>>> >>> >> >
>>>>>>> >>> >> > The hardware migration was performed by just setting the crush
>>>>>>> >>> >> > map to
>>>>>>> >>> >> > zero
>>>>>>> >>> >> > for the OSD we wanted to retire.   The system was performing
>>>>>>> >>> >> > poorly
>>>>>>> >>> >> > with
>>>>>>> >>> >> > these older OSDs and we had a difficult time maintaining
>>>>>>> >>> >> > stability of
>>>>>>> >>> >> > the
>>>>>>> >>> >> > system.    The old OSDs are still there but all of the data is
>>>>>>> >>> >> > now
>>>>>>> >>> >> > migrated
>>>>>>> >>> >> > to new and/or existing hardware.
>>>>>>> >>> >> >
>>>>>>> >>> >> > Thanks,
>>>>>>> >>> >> > Jeff
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> > On Mon, Mar 7, 2016 at 2:56 PM, Gregory Farnum
>>>>>>> >>> >> > <gfarnum@xxxxxxxxxx>
>>>>>>> >>> >> > wrote:
>>>>>>> >>> >> >>
>>>>>>> >>> >> >> On Mon, Mar 7, 2016 at 12:07 PM, Jeffrey McDonald
>>>>>>> >>> >> >> <jmcdonal@xxxxxxx>
>>>>>>> >>> >> >> wrote:
>>>>>>> >>> >> >> > Hi,
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > For a while, we've been seeing inconsistent placement groups
>>>>>>> >>> >> >> > on
>>>>>>> >>> >> >> > our
>>>>>>> >>> >> >> > erasure
>>>>>>> >>> >> >> > coded system.   The placement groups go from a state of
>>>>>>> >>> >> >> > active+clean
>>>>>>> >>> >> >> > to
>>>>>>> >>> >> >> > active+clean+inconsistent after a deep scrub:
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > 2016-03-07 13:45:42.044131 7f385d118700 -1
>>>>>>> >>> >> >> > log_channel(cluster)
>>>>>>> >>> >> >> > log
>>>>>>> >>> >> >> > [ERR] :
>>>>>>> >>> >> >> > 70.320s0 deep-scrub stat mismatch, got 21446/21428 objects,
>>>>>>> >>> >> >> > 0/0
>>>>>>> >>> >> >> > clones,
>>>>>>> >>> >> >> > 21446/21428 dirty, 0/0 omap, 0/0 hit_set_archive, 0/0
>>>>>>> >>> >> >> > whiteouts,
>>>>>>> >>> >> >> > 64682334170/64624353083 bytes,0/0 hit_set_archive bytes.
>>>>>>> >>> >> >> > 2016-03-07 13:45:42.044416 7f385d118700 -1
>>>>>>> >>> >> >> > log_channel(cluster)
>>>>>>> >>> >> >> > log
>>>>>>> >>> >> >> > [ERR] :
>>>>>>> >>> >> >> > 70.320s0 deep-scrub 18 missing, 0 inconsistent objects
>>>>>>> >>> >> >> > 2016-03-07 13:45:42.044464 7f385d118700 -1
>>>>>>> >>> >> >> > log_channel(cluster)
>>>>>>> >>> >> >> > log
>>>>>>> >>> >> >> > [ERR] :
>>>>>>> >>> >> >> > 70.320 deep-scrub 73 errors
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > So I tell the placement group to perform a repair:
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > 2016-03-07 13:49:26.047177 7f385d118700  0
>>>>>>> >>> >> >> > log_channel(cluster)
>>>>>>> >>> >> >> > log
>>>>>>> >>> >> >> > [INF] :
>>>>>>> >>> >> >> > 70.320 repair starts
>>>>>>> >>> >> >> > 2016-03-07 13:49:57.087291 7f3858b0a700  0 --
>>>>>>> >>> >> >> > 10.31.0.2:6874/13937
>>>>>>> >>> >> >> > >>
>>>>>>> >>> >> >> > 10.31.0.6:6824/8127 pipe(0x2e578000 sd=697 :6874
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > The repair finds missing shards and repairs them, but then I
>>>>>>> >>> >> >> > have
>>>>>>> >>> >> >> > 18
>>>>>>> >>> >> >> > 'unfound objects' :
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > 2016-03-07 13:51:28.467590 7f385d118700 -1
>>>>>>> >>> >> >> > log_channel(cluster)
>>>>>>> >>> >> >> > log
>>>>>>> >>> >> >> > [ERR] :
>>>>>>> >>> >> >> > 70.320s0 repair stat mismatch, got 21446/21428 objects, 0/0
>>>>>>> >>> >> >> > clones,
>>>>>>> >>> >> >> > 21446/21428 dirty, 0/0 omap, 0/0 hit_set_archive, 0/0
>>>>>>> >>> >> >> > whiteouts,
>>>>>>> >>> >> >> > 64682334170/64624353083 bytes,0/0 hit_set_archive bytes.
>>>>>>> >>> >> >> > 2016-03-07 13:51:28.468358 7f385d118700 -1
>>>>>>> >>> >> >> > log_channel(cluster)
>>>>>>> >>> >> >> > log
>>>>>>> >>> >> >> > [ERR] :
>>>>>>> >>> >> >> > 70.320s0 repair 18 missing, 0 inconsistent objects
>>>>>>> >>> >> >> > 2016-03-07 13:51:28.469431 7f385d118700 -1
>>>>>>> >>> >> >> > log_channel(cluster)
>>>>>>> >>> >> >> > log
>>>>>>> >>> >> >> > [ERR] :
>>>>>>> >>> >> >> > 70.320 repair 73 errors, 73 fixed
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > I've traced one of the unfound objects all the way through the
>>>>>>> >>> >> >> > system
>>>>>>> >>> >> >> > and
>>>>>>> >>> >> >> > I've found that they are not really lost.   I can fail over
>>>>>>> >>> >> >> > the
>>>>>>> >>> >> >> > osd
>>>>>>> >>> >> >> > and
>>>>>>> >>> >> >> > recover the files.   This is happening quite regularly now
>>>>>>> >>> >> >> > after a
>>>>>>> >>> >> >> > large
>>>>>>> >>> >> >> > migration of data from old hardware to new(migration is now
>>>>>>> >>> >> >> > complete).
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > The system sets the PG into 'recovery', but we've seen the
>>>>>>> >>> >> >> > system
>>>>>>> >>> >> >> > in
>>>>>>> >>> >> >> > a
>>>>>>> >>> >> >> > recovering state for many days.    Should we just be patient
>>>>>>> >>> >> >> > or do
>>>>>>> >>> >> >> > we
>>>>>>> >>> >> >> > need
>>>>>>> >>> >> >> > to dig further into the issue?
>>>>>>> >>> >> >>
>>>>>>> >>> >> >> You may need to dig into this more, although I'm not sure what
>>>>>>> >>> >> >> the
>>>>>>> >>> >> >> issue is likely to be. What version of Ceph are you running? How
>>>>>>> >>> >> >> did
>>>>>>> >>> >> >> you do this hardware migration?
>>>>>>> >>> >> >> -Greg
>>>>>>> >>> >> >>
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > pg 70.320 is stuck unclean for 704.803040, current state
>>>>>>> >>> >> >> > active+recovering,
>>>>>>> >>> >> >> > last acting [277,101,218,49,304,412]
>>>>>>> >>> >> >> > pg 70.320 is active+recovering, acting
>>>>>>> >>> >> >> > [277,101,218,49,304,412],
>>>>>>> >>> >> >> > 18
>>>>>>> >>> >> >> > unfound
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > There is no indication of any problems with down OSDs or
>>>>>>> >>> >> >> > network
>>>>>>> >>> >> >> > issues
>>>>>>> >>> >> >> > with
>>>>>>> >>> >> >> > OSDs.
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > Thanks,
>>>>>>> >>> >> >> > Jeff
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > --
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > Jeffrey McDonald, PhD
>>>>>>> >>> >> >> > Assistant Director for HPC Operations
>>>>>>> >>> >> >> > Minnesota Supercomputing Institute
>>>>>>> >>> >> >> > University of Minnesota Twin Cities
>>>>>>> >>> >> >> > 599 Walter Library           email:
>>>>>>> >>> >> >> > jeffrey.mcdonald@xxxxxxxxxxx
>>>>>>> >>> >> >> > 117 Pleasant St SE           phone: +1 612 625-6905
>>>>>>> >>> >> >> > Minneapolis, MN 55455        fax:   +1 612 624-8861
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >> > _______________________________________________
>>>>>>> >>> >> >> > ceph-users mailing list
>>>>>>> >>> >> >> > ceph-users@xxxxxxxxxxxxxx
>>>>>>> >>> >> >> > http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>>>>>>> >>> >> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >> > --
>>>>>>> >>> >> >
>>>>>>> >>> >> > Jeffrey McDonald, PhD
>>>>>>> >>> >> > Assistant Director for HPC Operations
>>>>>>> >>> >> > Minnesota Supercomputing Institute
>>>>>>> >>> >> > University of Minnesota Twin Cities
>>>>>>> >>> >> > 599 Walter Library           email: jeffrey.mcdonald@xxxxxxxxxxx
>>>>>>> >>> >> > 117 Pleasant St SE           phone: +1 612 625-6905
>>>>>>> >>> >> > Minneapolis, MN 55455        fax:   +1 612 624-8861
>>>>>>> >>> >> >
>>>>>>> >>> >> >
>>>>>>> >>> >
>>>>>>> >>> >
>>>>>>> >>> >
>>>>>>> >>> >
>>>>>>> >>> > --
>>>>>>> >>> >
>>>>>>> >>> > Jeffrey McDonald, PhD
>>>>>>> >>> > Assistant Director for HPC Operations
>>>>>>> >>> > Minnesota Supercomputing Institute
>>>>>>> >>> > University of Minnesota Twin Cities
>>>>>>> >>> > 599 Walter Library           email: jeffrey.mcdonald@xxxxxxxxxxx
>>>>>>> >>> > 117 Pleasant St SE           phone: +1 612 625-6905
>>>>>>> >>> > Minneapolis, MN 55455        fax:   +1 612 624-8861
>>>>>>> >>> >
>>>>>>> >>> >
>>>>>>> >>> >
>>>>>>> >>> > _______________________________________________
>>>>>>> >>> > ceph-users mailing list
>>>>>>> >>> > ceph-users@xxxxxxxxxxxxxx
>>>>>>> >>> > http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>>>>>>> >>> >
>>>>>>> >>
>>>>>>> >>
>>>>>>> >>
>>>>>>> >>
>>>>>>> >> --
>>>>>>> >>
>>>>>>> >> Jeffrey McDonald, PhD
>>>>>>> >> Assistant Director for HPC Operations
>>>>>>> >> Minnesota Supercomputing Institute
>>>>>>> >> University of Minnesota Twin Cities
>>>>>>> >> 599 Walter Library           email: jeffrey.mcdonald@xxxxxxxxxxx
>>>>>>> >> 117 Pleasant St SE           phone: +1 612 625-6905
>>>>>>> >> Minneapolis, MN 55455        fax:   +1 612 624-8861
>>>>>>> >>
>>>>>>> >>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>>
>>>>>> Jeffrey McDonald, PhD
>>>>>> Assistant Director for HPC Operations
>>>>>> Minnesota Supercomputing Institute
>>>>>> University of Minnesota Twin Cities
>>>>>> 599 Walter Library           email: jeffrey.mcdonald@xxxxxxxxxxx
>>>>>> 117 Pleasant St SE           phone: +1 612 625-6905
>>>>>> Minneapolis, MN 55455        fax:   +1 612 624-8861
>>>>>>
>>>>>>
>>> _______________________________________________
>>> ceph-users mailing list
>>> ceph-users@xxxxxxxxxxxxxx
>>> http://lists.ceph.com/listinfo.cgi/ceph-users-ceph.com
>>
>>
>>
>> --
>> Email:
>> shinobu@xxxxxxxxx
>> GitHub:
>> shinobu-x
>> Blog:
>> Life with Distributed Computational System based on OpenSource
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