Re: [rados-java] SIGSEGV librados.so Ubuntu

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Thank you Florent and Wido,

It seems that the sigsegv error occurs regardless of the code. Even if I do not upload a file, the error occurs after a couple of minutes... Strange!

Thanks again,

Kees


Op 28-12-2015 om 13:54 schreef Florent Manens:
Hi Kees,

I didn't test but try this :

String file_id = "testupload_" + Id.getNext("file_id");

         try {
             String config_file = "/etc/ceph/ceph.conf";
// nothing fancy here
             String id = "admin";
             String pool = "temp";

             Rados rados;
             IoCTX ioctx;

             // make the connection
             rados = new Rados(id) {
             };
             rados.confReadFile(new File(config_file));
             rados.connect();
             ioctx = rados.ioCtxCreate(pool);

             // read bytes from the inputstream
             int read = 0;
             long bytesRead = 0;
             byte[] bytes = new byte[8192];

             while ((read = inputStream.read(bytes)) !=
                     -1) {
                 //truncate to really read data
                 byte[] real_buff = Arrays.copyOf(bytes, read);
                 ioctx.write(file_id, real_buff, bytesRead);
                 bytesRead += read;
             }

             // close the connection
             rados.ioCtxDestroy(ioctx);
             rados.shutDown();
         } catch (RadosException ex) {
             Logger.getLogger(ApiFunction_dvd_upload.class.getName()).log(Level.SEVERE,
                     null, ex);
         }

I use Rados object for my Zimbra<->Ceph connector and I don't have segfault problems with rados-java.

Best regards,


----- Le 28 Déc 15, à 13:43, KeesBoog techie2015@xxxxxxxxxxxxxx a écrit :

Hi Florent,
Thanks.
I did not consider 'plain Rados objects' and I am not sure how that
would work. If you think that would solve the problem, perhaps you could
elaborate?
Would I still need Rbd to create a new image and set the size?
In the example I replaced
RbdImage image = rbd.open(file_id);
image.write(bytes, bytesRead, read);
with
ioctx.write("rbd_id."+file_id, bytes, bytesRead);
but
a) the image-file was empty after the upload (so I am sure I am doing
something wrong)
b) the SIGSEGV-error was still there (after a few minutes)
Best Regards,
Kees
Op 28-12-2015 om 12:33 schreef Florent Manens:
Hi Kees,
Why don't you use plain Rados objects instead of a RBD ?
Best regards,
----- Le 28 Déc 15, à 11:54, KeesBoog techie2015@xxxxxxxxxxxxxx a écrit :
Thanks Wido,
Here is the example code, taken from a Java web application.
There are no other calls to Rbd/Rados in the code.
// code altered for sake of the example
(everything in one try/catch and random file name and initial size)
// objective: read binary file(s) from an
inputstream to a ceph image
String file_id = "testupload_" +
Id.getNext("file_id");
long initialsize = 1000000000L;
try {
String config_file = "/etc/ceph/ceph.conf";
// nothing fancy here
String id = "admin";
String pool = "temp";
Rados rados;
IoCTX ioctx;
Rbd rbd;
// make the connection
rados = new Rados(id) {
};
rados.confReadFile(new File(config_file));
rados.connect();
ioctx = rados.ioCtxCreate(pool);
rbd = new Rbd(ioctx);
// create the file with initial size
(larger than actual size)
int features = (1 << 0);
rbd.create(file_id, initialsize, features, 0);
// open the image
RbdImage image = rbd.open(file_id);;
// read bytes from the inputstream
int read = 0;
long bytesRead = 0;
byte[] bytes = new byte[8192];
while ((read = inputStream.read(bytes)) !=
-1) {
image.write(bytes, bytesRead, read);
bytesRead += read;
}
// adjust size to the actual read bytes
image.resize(bytesRead);
// close the image
rbd.close(image);
// close the connection
rados.ioCtxDestroy(ioctx);
rados.shutDown();
} catch (RadosException ex) {
Logger.getLogger(ApiFunction_dvd_upload.class.getName()).log(Level.SEVERE,
null, ex);
}
This all works.
I uploaded a very small text-file.
rbd info temp/testupload_1028
rbd image 'testupload_1028':
size 5069 bytes in 1 objects
order 22 (4096 kB objects)
block_name_prefix: rbd_data.1f61b774b0dc51
format: 2
features: layering
About 40 seconds after the successful upload (the content equals the
original content) I get an unexpected SIGSEGV-error as reported (without
a stacktrace).
After a restart of Tomcat I did a second upload with a somewhat larger file:
rbd info temp/testupload_1030
rbd image 'testupload_1030':
size 41151 kB in 11 objects
order 22 (4096 kB objects)
block_name_prefix: rbd_data.1f61c62ae8944a
format: 2
features: layering
About 3 minutes after the successful upload I got the same SIGSEGV-error.
And a third (first restart Tomcat again):
rbd info temp/testupload_1032
rbd image 'testupload_1032':
size 127 MB in 32 objects
order 22 (4096 kB objects)
block_name_prefix: rbd_data.1f61fc2ae8944a
format: 2
features: layering
About 2 minutes after the successful upload I got the same SIGSEGV-error.
Thanks again.
Kees
Op 28-12-2015 om 10:21 schreef Wido den Hollander:
On 12/28/2015 07:18 AM, KeesBoog wrote:
Hi,
I do love rados-java! I do get listings of ceph pools; I even can upload
files to a ceph pool with a Tomcat web application. That is great!
Great to hear!
However, I get frequent SIGSEGV errors (which halt Tomcat):
Ok, that is not good. Can you reproduce it with maybe some example code?
I would like to dig down to where this is happening, but if you are able
to reproduce it with some simple example code it would be great.
Or a stacktrace on which call it actually dies.
Wido
#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGSEGV (0xb) at pc=0x00007fd4bc54166d, pid=25308, tid=140554357282560
#
# JRE version: OpenJDK Runtime Environment (7.0_91-b02) (build
1.7.0_91-b02)
# Java VM: OpenJDK 64-Bit Server VM (24.91-b01 mixed mode linux-amd64
compressed oops)
# Derivative: IcedTea 2.6.3
# Distribution: Ubuntu 14.04 LTS, package 7u91-2.6.3-0ubuntu0.14.04.1
# Problematic frame:
# C [librados.so.2+0x28766d] Mutex::Lock(bool)+0xd
#
# Failed to write core dump. Core dumps have been disabled. To enable
core dumping, try "ulimit -c unlimited" before starting Java again
#
# An error report file with more information is saved as:
# /tmp/hs_err_pid25308.log
#
# If you would like to submit a bug report, please include
# instructions on how to reproduce the bug and visit:
# http://icedtea.classpath.org/bugzilla
#
Please find the file hs_err_pid25308.log attached. I could send a few more.
It would be great if someone could point me to a workaround of perhaps
even fix the issue.
Best Regards,
Kees

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