Re: revisiting uneven CRUSH distributions

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Hi Stefan,

On 05/01/2017 07:15 PM, Stefan Priebe - Profihost AG wrote:
> That sounds amazing! Is there any chance this will be backported to jewel?

There should be ways to make that work with kraken and jewel. It may not even require a backport. If you know of a cluster with an uneven distribution, it would be great if you could send the crushmap so that I can test the algorithm. I'm still not sure this is the right solution and it would help confirm that.

Cheers

> 
> Greets,
> Stefan
> 
> Am 30.04.2017 um 16:15 schrieb Loic Dachary:
>> Hi,
>>
>> Ideally CRUSH distributes PGs evenly on OSDs so that they all fill in
>> the same proportion. If an OSD is 75% full, it is expected that all
>> other OSDs are also 75% full.
>>
>> In reality the distribution is even only when more than 100,000 PGs
>> are distributed in a pool of size 1 (i.e. no replication).
>>
>> In small clusters there are a few thousands PGs and it is not enough
>> to get an even distribution. Running the following with
>> python-crush[1], shows a 15% difference when distributing 1,000 PGs on
>> 6 devices. Only with 1,000,000 PGs does the difference drop under 1%.
>>
>>   for PGs in 1000 10000 100000 1000000 ; do
>>     crush analyze --replication-count 1 \
>>                   --type device \
>>                   --values-count $PGs \
>>                   --rule data \
>>                   --crushmap tests/sample-crushmap.json
>>   done
>>
>> In larger clusters, even though a greater number of PGs are
>> distributed, there are at most a few dozens devices per host and the
>> problem remains. On a machine with 24 OSDs each expected to handle a
>> few hundred PGs, a total of a few thousands PGs are distributed which
>> is not enough to get an even distribution.
>>
>> There is a secondary reason for the distribution to be uneven, when
>> there is more than one replica. The second replica must be on a
>> different device than the first replica. This conditional probability
>> is not taken into account by CRUSH and would create an uneven
>> distribution if more than 10,000 PGs were distributed per OSD[2]. But
>> a given OSD can only handle a few hundred PGs and this conditional
>> probability bias is dominated by the uneven distribution caused by the
>> low number of PGs.
>>
>> The uneven CRUSH distributions are always caused by a low number of
>> samples, even in large clusters. Since this noise (i.e. the difference
>> between the desired distribution and the actual distribution) is
>> random, it cannot be fixed by optimizations methods.  The
>> Nedler-Mead[3] simplex converges to a local minimum that is far from
>> the optimal minimum in many cases. Broyden–Fletcher–Goldfarb–Shanno[4]
>> fails to find a gradient that would allow it to converge faster. And
>> even if it did, the local minimum found would be as often wrong as
>> with Nedler-Mead, only it would go faster. A least mean squares
>> filter[5] is equally unable to suppress the noise created by the
>> uneven distribution because no coefficients can model a random noise.
>>
>> With that in mind, I implemented a simple optimization algorithm[6]
>> which was first suggested by Thierry Delamare a few weeks ago. It goes
>> like this:
>>
>>     - Distribute the desired number of PGs[7]
>>     - Subtract 1% of the weight of the OSD that is the most over used
>>     - Add the subtracted weight to the OSD that is the most under used
>>     - Repeat until the Kullback–Leibler divergence[8] is small enough
>>
>> Quoting Adam Kupczyk, this works because:
>>
>>   "...CRUSH is not random proces at all, it behaves in numerically
>>    stable way.  Specifically, if we increase weight on one node, we
>>    will get more PGs on this node and less on every other node:
>>    CRUSH([10.1, 10, 10, 5, 5]) -> [146(+3), 152, 156(-2), 70(-1), 76]"
>>
>> A nice side effect of this optimization algorithm is that it does not
>> change the weight of the bucket containing the items being
>> optimized. It is local to a bucket with no influence on the other
>> parts of the crushmap (modulo the conditional probability bias).
>>
>> In all tests the situation improves at least by an order of
>> magnitude. For instance when there is a 30% difference between two
>> OSDs, it is down to less than 3% after optimization.
>>
>> The tests for the optimization method can be run with
>>
>>    git clone -b wip-fix-2 http://libcrush.org/dachary/python-crush.git
>>    tox -e py27 -- -s -vv -k test_fix tests/test_analyze.py
>>
>> If anyone think of a reason why this algorithm won't work in some
>> cases, please speak up :-)
>>
>> Cheers
>>
>> [1] python-crush http://crush.readthedocs.io/
>> [2] crush multipick anomaly http://marc.info/?l=ceph-devel&m=148539995928656&w=2
>> [3] Nedler-Mead https://en.wikipedia.org/wiki/Nelder%E2%80%93Mead_method
>> [4] L-BFGS-B https://docs.scipy.org/doc/scipy-0.18.1/reference/optimize.minimize-lbfgsb.html#optimize-minimize-lbfgsb
>> [5] Least mean squares filter https://en.wikipedia.org/wiki/Least_mean_squares_filter
>> [6] http://libcrush.org/dachary/python-crush/blob/c6af9bbcbef7123af84ee4d75d63dd1b967213a2/tests/test_analyze.py#L39
>> [7] Predicting Ceph PG placement http://dachary.org/?p=4020
>> [8] Kullback–Leibler divergence https://en.wikipedia.org/wiki/Kullback%E2%80%93Leibler_divergence
>>
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-- 
Loïc Dachary, Artisan Logiciel Libre
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